Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   M0P28_RS02775 Genome accession   NZ_CP116958
Coordinates   503156..504241 (+) Length   361 a.a.
NCBI ID   WP_117479346.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain WUSP074     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 498156..509241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P28_RS02750 (M0P28_02750) asnA 499153..500145 (+) 993 WP_003063615.1 aspartate--ammonia ligase -
  M0P28_RS02755 (M0P28_02755) - 500279..501010 (-) 732 WP_003063617.1 hypothetical protein -
  M0P28_RS02760 (M0P28_02760) - 501172..501975 (-) 804 WP_041972923.1 hypothetical protein -
  M0P28_RS02765 (M0P28_02765) rsmD 502109..502648 (+) 540 WP_041972944.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  M0P28_RS02770 (M0P28_02770) coaD 502681..503178 (+) 498 WP_013851552.1 pantetheine-phosphate adenylyltransferase -
  M0P28_RS02775 (M0P28_02775) sepM 503156..504241 (+) 1086 WP_117479346.1 SepM family pheromone-processing serine protease Regulator
  M0P28_RS02780 (M0P28_02780) - 504370..504624 (+) 255 WP_003063626.1 DUF3923 family protein -
  M0P28_RS02785 (M0P28_02785) - 504717..504845 (+) 129 WP_003063628.1 hypothetical protein -
  M0P28_RS02790 (M0P28_02790) - 504907..506232 (+) 1326 WP_117479343.1 bifunctional metallophosphatase/5'-nucleotidase -
  M0P28_RS02795 (M0P28_02795) - 506264..506842 (+) 579 WP_003063631.1 YutD family protein -
  M0P28_RS02800 (M0P28_02800) rlmN 506864..507970 (+) 1107 WP_003063632.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  M0P28_RS02805 (M0P28_02805) - 507970..508491 (+) 522 WP_117479342.1 VanZ family protein -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39075.77 Da        Isoelectric Point: 4.0907

>NTDB_id=781685 M0P28_RS02775 WP_117479346.1 503156..504241(+) (sepM) [Streptococcus pasteurianus strain WUSP074]
MAILKRFKEILKKLGRILYRFKWWILGVVGIVFLLFSLLYPLDYYIEMPGGAYDIRSVLTVDNKEDDEDGSYNFVAVTVS
QATLAQLVYAWLTPYTEISTAADVTGGYSNADYLRINEYYMETSQNTATYQALTLAGKEATLDYQGVYVLNVSDNSTFKG
ILNISDTVTGVNGQTFNSSAELMAYVADLDLGSEVTVQYTSDGEAKEATGKIIELSNGKNGIGIGLVDHTSVSSEVDVNF
DTSGVGGPSAGLMFTLDIYDQLNSEDLRKGRKIAGTGTIESDGSVGDIGGAALKVVAAAKAGADIFFVPNNPVDEETLKK
DPDAKTNYEEAVAAAKDLDTDMKIVPVTTVQEAIDYLRNND

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=781685 M0P28_RS02775 WP_117479346.1 503156..504241(+) (sepM) [Streptococcus pasteurianus strain WUSP074]
ATGGCAATCTTAAAAAGATTTAAAGAGATTTTGAAAAAGTTGGGTCGTATTTTATATCGCTTTAAGTGGTGGATATTAGG
TGTTGTAGGCATTGTTTTCTTACTATTTAGCTTGTTGTATCCGCTTGATTACTATATTGAAATGCCTGGTGGTGCTTATG
ATATTCGTAGCGTTTTAACGGTTGATAATAAGGAAGATGACGAAGATGGCTCTTATAATTTTGTGGCTGTCACGGTTAGT
CAGGCGACCTTGGCACAATTGGTTTATGCTTGGTTAACTCCCTACACAGAAATTTCGACAGCCGCAGATGTGACTGGTGG
TTATAGCAATGCTGATTATCTTCGTATCAATGAGTATTACATGGAAACCTCTCAGAATACAGCGACTTATCAAGCCTTAA
CATTGGCAGGAAAGGAAGCAACGCTTGATTATCAAGGGGTTTATGTTTTAAATGTTAGTGATAATTCGACGTTTAAAGGG
ATTTTGAATATCTCTGATACGGTAACTGGGGTTAACGGTCAGACATTTAACAGCTCGGCAGAATTAATGGCCTATGTGGC
TGATTTGGATTTAGGGTCTGAAGTAACTGTTCAATATACATCAGACGGCGAAGCAAAAGAAGCCACAGGAAAAATTATTG
AATTGTCAAATGGAAAAAATGGTATCGGAATCGGTTTGGTAGATCATACGTCGGTGTCATCAGAGGTTGATGTTAATTTT
GATACGAGTGGTGTTGGTGGTCCAAGTGCTGGTTTGATGTTTACGCTTGATATTTATGACCAATTAAACAGTGAAGATTT
GCGTAAAGGTCGTAAAATTGCTGGTACAGGTACGATTGAATCAGATGGTTCAGTCGGGGATATTGGTGGCGCAGCACTTA
AAGTTGTTGCTGCTGCTAAAGCTGGTGCAGATATTTTCTTTGTTCCAAATAACCCTGTGGATGAGGAAACATTGAAAAAA
GACCCAGATGCGAAAACGAACTATGAAGAAGCTGTCGCAGCTGCTAAAGACCTCGATACCGATATGAAAATCGTTCCAGT
CACAACTGTTCAAGAAGCAATTGACTATCTGCGAAATAATGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

67.449

94.46

0.637