Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   M0P24_RS11275 Genome accession   NZ_CP116957
Coordinates   2202471..2203184 (+) Length   237 a.a.
NCBI ID   WP_111718468.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain WUSP070     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2197471..2208184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P24_RS11260 (M0P24_11260) - 2198325..2198657 (+) 333 WP_043910338.1 hypothetical protein -
  M0P24_RS11265 (M0P24_11265) treC 2198607..2200286 (-) 1680 WP_048790988.1 alpha,alpha-phosphotrehalase -
  M0P24_RS11270 (M0P24_11270) treP 2200301..2202274 (-) 1974 WP_048790987.1 PTS system trehalose-specific EIIBC component -
  M0P24_RS11275 (M0P24_11275) treR 2202471..2203184 (+) 714 WP_111718468.1 trehalose operon repressor Regulator
  M0P24_RS11280 (M0P24_11280) - 2203594..2203944 (-) 351 Protein_2176 isopeptide-forming domain-containing fimbrial protein -
  M0P24_RS11285 (M0P24_11285) ruvB 2204772..2205770 (-) 999 WP_003066863.1 Holliday junction branch migration DNA helicase RuvB -
  M0P24_RS11290 (M0P24_11290) nrdG 2205899..2206513 (-) 615 WP_003066866.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  M0P24_RS11295 (M0P24_11295) - 2206554..2207060 (-) 507 WP_003066869.1 GNAT family N-acetyltransferase -
  M0P24_RS11300 (M0P24_11300) - 2207072..2207218 (-) 147 WP_013852326.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27358.36 Da        Isoelectric Point: 7.3320

>NTDB_id=781656 M0P24_RS11275 WP_111718468.1 2202471..2203184(+) (treR) [Streptococcus pasteurianus strain WUSP070]
MKKYEQIFKDLEHDITSGIYQAGDYLPTENELTQTYHMSRDTIRKALSLLAEAGLIQKIHGSGSQVIKHEQIDFPVSQLT
SYKELVDAHHINSKTNVIAIDKLIVDEKLAALTGFKKNNLVWRIIRQRVVDGAASVLDIDYLDKKIVPNMTREIAEQSIY
DYLENQLHLIIAFAQKEITIDQLTDRDKLLLDIGAEHHVVSVKSKVYLANKHQFQFTESRHKLEKFRFVDFATRKPQ

Nucleotide


Download         Length: 714 bp        

>NTDB_id=781656 M0P24_RS11275 WP_111718468.1 2202471..2203184(+) (treR) [Streptococcus pasteurianus strain WUSP070]
ATGAAAAAATACGAACAAATCTTTAAAGACCTTGAACACGATATTACCTCTGGCATTTACCAAGCTGGTGACTATCTCCC
CACCGAAAACGAGCTAACCCAAACCTACCATATGAGCCGTGACACTATCCGCAAAGCGCTTAGTCTCCTTGCTGAAGCAG
GGCTCATCCAGAAAATTCATGGTTCTGGCTCTCAAGTCATCAAACACGAGCAGATTGATTTTCCCGTTTCACAGCTCACA
AGCTATAAAGAACTGGTCGATGCTCACCATATCAATTCCAAAACCAATGTCATTGCCATTGATAAACTTATCGTTGATGA
AAAATTAGCTGCGCTGACAGGTTTCAAGAAAAATAACCTTGTCTGGCGAATCATTCGCCAACGTGTCGTTGACGGCGCCG
CTTCTGTCCTTGACATTGATTATTTAGACAAAAAAATCGTGCCAAATATGACACGAGAAATCGCCGAACAATCCATTTAC
GATTACCTTGAAAACCAACTCCACCTCATCATCGCTTTCGCTCAAAAAGAAATCACCATTGACCAGCTAACTGACCGTGA
CAAACTACTCCTTGACATCGGTGCCGAACACCACGTTGTCTCTGTCAAATCAAAAGTTTACCTCGCCAACAAACACCAAT
TCCAATTCACCGAAAGCAGACACAAACTCGAAAAATTCCGCTTCGTTGACTTCGCAACCCGAAAACCACAGTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

71.795

98.734

0.709