Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   M0P24_RS08780 Genome accession   NZ_CP116957
Coordinates   1729997..1730722 (-) Length   241 a.a.
NCBI ID   WP_013851484.1    Uniprot ID   A0AAW6YMQ9
Organism   Streptococcus pasteurianus strain WUSP070     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1724997..1735722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P24_RS08750 (M0P24_08750) rimP 1725723..1726208 (-) 486 WP_172456429.1 ribosome maturation factor RimP -
  M0P24_RS11755 - 1726461..1726938 (-) 478 Protein_1734 hypothetical protein -
  M0P24_RS08765 (M0P24_08765) trmB 1727464..1728102 (-) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  M0P24_RS08770 (M0P24_08770) ccrZ 1728102..1728896 (-) 795 WP_012961430.1 cell cycle regulator CcrZ -
  M0P24_RS08775 (M0P24_08775) - 1728961..1729995 (-) 1035 WP_117508853.1 ABC transporter permease -
  M0P24_RS08780 (M0P24_08780) pptA 1729997..1730722 (-) 726 WP_013851484.1 ABC transporter ATP-binding protein Regulator
  M0P24_RS08785 (M0P24_08785) - 1730786..1731205 (+) 420 WP_117508854.1 HIT family protein -
  M0P24_RS08790 (M0P24_08790) - 1731202..1731504 (+) 303 WP_003063390.1 hypothetical protein -
  M0P24_RS08795 (M0P24_08795) brpA 1731623..1732780 (-) 1158 WP_003063388.1 biofilm formation/cell division transcriptional regulator BrpA -
  M0P24_RS08800 (M0P24_08800) - 1732791..1733303 (-) 513 WP_117508855.1 GNAT family N-acetyltransferase -
  M0P24_RS08805 (M0P24_08805) tsaE 1733296..1733739 (-) 444 WP_003063385.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  M0P24_RS08810 (M0P24_08810) - 1733923..1735344 (-) 1422 WP_013851479.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26764.09 Da        Isoelectric Point: 4.4838

>NTDB_id=781635 M0P24_RS08780 WP_013851484.1 1729997..1730722(-) (pptA) [Streptococcus pasteurianus strain WUSP070]
MLKIENITGGYINIPVLKNISFEVGDGELIGLIGLNGAGKSTTINEIIGLLTPYQGQISIDGLTLAQNQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLNYDEAMARATELLELFRLSDKLEWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTELLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHQGKIRATGTLAELREAFGDETATLNDIYMSLTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=781635 M0P24_RS08780 WP_013851484.1 1729997..1730722(-) (pptA) [Streptococcus pasteurianus strain WUSP070]
ATGTTAAAAATTGAAAATATAACAGGGGGATATATTAACATCCCTGTCTTAAAAAATATTTCTTTTGAAGTTGGTGATGG
TGAGCTTATTGGCTTAATTGGTTTGAATGGGGCTGGTAAGTCAACGACAATCAATGAAATTATTGGGCTCTTAACGCCAT
ATCAAGGGCAAATTTCGATTGATGGTTTGACTTTGGCGCAGAATCAGGCAGAATATCGTAAGAAAATTGGATTTATCCCA
GAAACGCCAAGTTTATATGAAGAATTGACTTTACGTGAACATTTAGAAACAGTTGCAATGGCTTATGACCTTAATTATGA
TGAGGCGATGGCGCGTGCGACAGAATTGTTGGAACTTTTCCGTTTATCTGATAAATTAGAGTGGTTTCCGATTAATTTCT
CTAAAGGGATGAAGCAGAAGGTCATGATTATTTGTGCCTTTATGGTTAATCCAAGTTTGTTTATCGTTGATGAGCCCTTT
TTGGGCTTGGACCCATTAGCAATTTCTGATTTGACAGAATTATTGGCGCAAGAAAAGGCAAAAGGAAAAGCGATTTTGAT
GTCAACACACGTTTTGGATGCTGCTGAAAAGATGTGTGACCGTTTTGTGATTTTGCATCAAGGGAAAATTCGTGCAACTG
GTACATTAGCAGAGCTACGTGAAGCATTTGGTGATGAGACAGCAACGCTTAATGATATTTATATGTCATTGACTAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.079

99.17

0.784
  pptA Streptococcus thermophilus LMD-9

78.661

99.17

0.78