Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   M0P24_RS08125 Genome accession   NZ_CP116957
Coordinates   1607807..1608892 (-) Length   361 a.a.
NCBI ID   WP_248498015.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain WUSP070     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1602807..1613892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P24_RS08095 (M0P24_08095) - 1603537..1604058 (-) 522 WP_058692767.1 VanZ family protein -
  M0P24_RS08100 (M0P24_08100) rlmN 1604058..1605164 (-) 1107 WP_058692766.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  M0P24_RS08105 (M0P24_08105) - 1605186..1605764 (-) 579 WP_003063631.1 YutD family protein -
  M0P24_RS08110 (M0P24_08110) - 1605796..1607121 (-) 1326 WP_058692765.1 bifunctional metallophosphatase/5'-nucleotidase -
  M0P24_RS08120 (M0P24_08120) - 1607424..1607678 (-) 255 WP_248498017.1 DUF3923 family protein -
  M0P24_RS08125 (M0P24_08125) sepM 1607807..1608892 (-) 1086 WP_248498015.1 SepM family pheromone-processing serine protease Regulator
  M0P24_RS08130 (M0P24_08130) coaD 1608870..1609367 (-) 498 WP_013851552.1 pantetheine-phosphate adenylyltransferase -
  M0P24_RS08135 (M0P24_08135) rsmD 1609400..1609939 (-) 540 WP_041972944.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  M0P24_RS08140 (M0P24_08140) - 1610073..1610876 (+) 804 WP_069789008.1 hypothetical protein -
  M0P24_RS08145 (M0P24_08145) - 1611038..1611769 (+) 732 WP_003063617.1 hypothetical protein -
  M0P24_RS08150 (M0P24_08150) asnA 1611903..1612895 (-) 993 WP_009853597.1 aspartate--ammonia ligase -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 38989.68 Da        Isoelectric Point: 4.1040

>NTDB_id=781629 M0P24_RS08125 WP_248498015.1 1607807..1608892(-) (sepM) [Streptococcus pasteurianus strain WUSP070]
MAILKRFKEILKKLGRILYRFKWWILGVVGIVFLLFSLLYPLDYYIEMPGGAYDIRSVLTVDNKEDDEDGSYNFVAVTVS
QATLAQLVYAWLTPYTEISTAADVTGGYSNADYLRINEYYMETSQNTATYQALTLAGKEATLDYQGVYVLNVSDNSTFKG
ILNISDTVTGVNGQTFNSSAELMAYVADLDLGSEVTVQYTSDGEAKEATGKIIELSNGKNGIGIGLVDHTSVSSDVDVNF
DTSGVGGPSAGLMFTLDIYDQLNSEDLRKGRKIAGTGTIESDGSVGDIGGAALKVVAAAKAGADIFFVPNNPVDEGTLKK
DPDAKTNYEEAVAAAKDLDTDMKIVPVTTVQEAIDYLRNND

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=781629 M0P24_RS08125 WP_248498015.1 1607807..1608892(-) (sepM) [Streptococcus pasteurianus strain WUSP070]
ATGGCAATCTTAAAAAGATTTAAAGAGATTTTGAAAAAGTTGGGTCGTATTTTATATCGCTTTAAGTGGTGGATATTAGG
TGTTGTAGGCATTGTTTTCTTACTATTTAGCTTGTTGTATCCGCTTGATTACTATATTGAAATGCCTGGTGGTGCTTATG
ATATTCGTAGCGTTTTAACGGTTGATAATAAGGAAGATGACGAAGATGGCTCTTATAATTTTGTGGCTGTCACGGTTAGT
CAGGCGACCTTGGCACAATTGGTTTATGCTTGGTTAACTCCCTACACAGAAATTTCGACAGCCGCAGATGTGACTGGTGG
TTATAGTAATGCTGATTATCTTCGTATCAATGAGTATTACATGGAAACCTCTCAGAATACAGCGACTTATCAAGCCTTAA
CATTGGCAGGAAAGGAAGCAACGCTTGATTATCAAGGGGTTTATGTTTTAAATGTTAGTGATAATTCGACGTTTAAAGGG
ATTTTGAATATCTCTGATACGGTAACTGGGGTTAACGGTCAGACATTTAACAGCTCGGCAGAATTAATGGCCTATGTGGC
TGATTTGGATTTAGGGTCTGAAGTAACTGTTCAATATACATCAGACGGCGAAGCAAAAGAAGCCACAGGAAAAATTATTG
AATTGTCAAATGGAAAAAATGGTATCGGAATCGGTTTGGTAGATCATACGTCGGTGTCATCAGATGTTGATGTTAATTTT
GATACGAGTGGTGTTGGTGGTCCAAGTGCTGGTTTGATGTTTACGCTTGATATTTATGACCAATTAAATAGTGAAGATTT
GCGTAAAGGTCGTAAAATTGCTGGTACAGGTACGATTGAATCAGATGGTTCAGTCGGGGATATTGGTGGCGCAGCACTTA
AAGTTGTTGCTGCTGCTAAAGCTGGTGCAGATATTTTCTTTGTTCCAAATAACCCTGTGGATGAGGGAACATTGAAAAAA
GACCCAGATGCGAAAACGAACTATGAAGAAGCTGTCGCAGCTGCTAAAGACCTCGATACCGATATGAAAATCGTTCCAGT
CACAACTGTTCAAGAAGCAATTGACTATCTGCGAAATAATGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

67.742

94.46

0.64