Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | OT343_RS05595 | Genome accession | NZ_CP116955 |
| Coordinates | 1071932..1072234 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter sp. CFSAN122719 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1066932..1077234
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OT343_RS05570 (OT343_05570) | rpsR | 1067295..1067555 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| OT343_RS05575 (OT343_05575) | lon | 1067615..1069990 (-) | 2376 | WP_002885146.1 | endopeptidase La | - |
| OT343_RS05580 (OT343_05580) | - | 1070007..1070654 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| OT343_RS05585 (OT343_05585) | fliW | 1070815..1071204 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| OT343_RS05590 (OT343_05590) | proC | 1071204..1071935 (+) | 732 | WP_038401410.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| OT343_RS05595 (OT343_05595) | ctsT | 1071932..1072234 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| OT343_RS05600 (OT343_05600) | - | 1072231..1072893 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| OT343_RS05605 (OT343_05605) | - | 1072890..1073342 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| OT343_RS05610 (OT343_05610) | - | 1073339..1073968 (-) | 630 | WP_002869541.1 | uroporphyrinogen-III synthase | - |
| OT343_RS05615 (OT343_05615) | thiE | 1073946..1074578 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| OT343_RS05620 (OT343_05620) | thiD | 1074568..1075380 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| OT343_RS05625 (OT343_05625) | - | 1075377..1076063 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| OT343_RS05630 (OT343_05630) | - | 1076060..1076821 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=781587 OT343_RS05595 WP_002853046.1 1071932..1072234(+) (ctsT) [Campylobacter sp. CFSAN122719]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=781587 OT343_RS05595 WP_002853046.1 1071932..1072234(+) (ctsT) [Campylobacter sp. CFSAN122719]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |