Detailed information NTG0781562

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: OT390_RS05855
• Genome accession: NZ_CP116953
• Coordinates: 1111116..1112066 (+)
• Length: 316 a.a.
• NCBI ID: WP_002853794.1
• Uniprot ID: -
• Organism: Campylobacter sp. CFSAN122748
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1106116..1117066

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OT390_RS05825 (OT390_05810)	neuC	1106706..1107830 (+)	1125	WP_002859249.1	UDP-N-acetylglucosamine 2-epimerase	-
OT390_RS05830 (OT390_05815)	-	1107823..1108321 (+)	499	Protein_1128	beta-1,4-N-acetylgalactosaminyltransferase	-
OT390_RS05835 (OT390_05820)	-	1108389..1108769 (+)	381	WP_186821394.1	hypothetical protein	-
OT390_RS05840 (OT390_05825)	-	1108766..1109431 (+)	666	WP_002935341.1	cytidylyltransferase domain-containing protein	-
OT390_RS05845 (OT390_05830)	-	1109555..1110253 (+)	699	WP_228589016.1	CatB-related O-acetyltransferase	-
OT390_RS05850 (OT390_05835)	-	1110245..1111057 (-)	813	WP_406611465.1	glycosyltransferase family 2 protein	-
OT390_RS05855 (OT390_05840)	waaF	1111116..1112066 (+)	951	WP_002853794.1	glycosyltransferase family 9 protein	Regulator
OT390_RS05860 (OT390_05845)	-	1112052..1112815 (-)	764	Protein_1134	glycosyltransferase family 25 protein	-
OT390_RS05865 (OT390_05850)	gmhA	1112815..1113375 (-)	561	WP_002787744.1	D-sedoheptulose 7-phosphate isomerase	-
OT390_RS05870 (OT390_05855)	rfaE1	1113372..1114757 (-)	1386	WP_002853608.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
OT390_RS05875 (OT390_05860)	rfaD	1114750..1115703 (-)	954	WP_002860242.1	ADP-glyceromanno-heptose 6-epimerase	-
OT390_RS05880 (OT390_05865)	gmhB	1115704..1116266 (-)	563	Protein_1138	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
OT390_RS05885 (OT390_05870)	-	1116347..1116649 (+)	303	WP_002852762.1	cytochrome c	-
OT390_RS05890 (OT390_05875)	ccoS	1116672..1116878 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36225.73 Da
• Isoelectric Point: 10.2421

>NTDB_id=781562 OT390_RS05855 WP_002853794.1 1111116..1112066(+) (waaF) [Campylobacter sp. CFSAN122748]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=781562 OT390_RS05855 WP_002853794.1 1111116..1112066(+) (waaF) [Campylobacter sp. CFSAN122748]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAACATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.61	99.051	0.927