Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | OT625_RS05295 | Genome accession | NZ_CP116951 |
| Coordinates | 1012636..1012938 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter sp. CFSAN122778 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1007636..1017938
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OT625_RS05270 (OT625_05235) | rpsR | 1007999..1008259 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| OT625_RS05275 (OT625_05240) | lon | 1008319..1010694 (-) | 2376 | WP_168977230.1 | endopeptidase La | - |
| OT625_RS05280 (OT625_05245) | - | 1010711..1011358 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| OT625_RS05285 (OT625_05250) | fliW | 1011519..1011908 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| OT625_RS05290 (OT625_05255) | proC | 1011908..1012639 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| OT625_RS05295 (OT625_05260) | ctsT | 1012636..1012938 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| OT625_RS05300 (OT625_05265) | - | 1012935..1013597 (+) | 663 | WP_052785236.1 | hypothetical protein | - |
| OT625_RS05305 (OT625_05270) | - | 1013594..1014046 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| OT625_RS05310 (OT625_05275) | - | 1014043..1014672 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| OT625_RS05315 (OT625_05280) | thiE | 1014650..1015282 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| OT625_RS05320 (OT625_05285) | thiD | 1015272..1016084 (-) | 813 | WP_002899485.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| OT625_RS05325 (OT625_05290) | - | 1016081..1016767 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| OT625_RS05330 (OT625_05295) | - | 1016764..1017525 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=781531 OT625_RS05295 WP_002853046.1 1012636..1012938(+) (ctsT) [Campylobacter sp. CFSAN122778]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=781531 OT625_RS05295 WP_002853046.1 1012636..1012938(+) (ctsT) [Campylobacter sp. CFSAN122778]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |