Detailed information NTG0078150

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: MWM20_RS19885
• Genome accession: NZ_AP025677
• Coordinates: 4102606..4103847 (+)
• Length: 413 a.a.
• NCBI ID: WP_001161851.1
• Uniprot ID: -
• Organism: Escherichia coli strain Rb-23
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 4097606..4108847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWM20_RS19870 (TRECRb23_37790)	-	4098121..4099797 (+)	1677	WP_001385481.1	polysaccharide biosynthesis/export family protein	-
MWM20_RS19875 (TRECRb23_37800)	kdsB	4099807..4100547 (+)	741	WP_001312097.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
MWM20_RS19880 (TRECRb23_37810)	-	4100544..4102571 (+)	2028	WP_000579528.1	capsular polysaccharide biosynthesis protein	-
MWM20_RS19885 (TRECRb23_37820)	kpsS	4102606..4103847 (+)	1242	WP_001161851.1	capsular biosynthesis protein	Regulator
MWM20_RS19890 (TRECRb23_37830)	-	4103968..4105308 (-)	1341	WP_021536598.1	glycosyltransferase family A protein	-
MWM20_RS19895 (TRECRb23_37840)	-	4105437..4106606 (-)	1170	WP_000685104.1	nucleotide sugar dehydrogenase	-
MWM20_RS19900 (TRECRb23_37850)	-	4106695..4107426 (-)	732	WP_000584102.1	glycosyltransferase family 2 protein	-
MWM20_RS19905 (TRECRb23_37860)	-	4107423..4108226 (-)	804	WP_244345520.1	hypothetical protein	-

Sequence

Protein

• Length: 413 a.a.
• Molecular weight: 49246.12 Da
• Isoelectric Point: 10.1882

>NTDB_id=78150 MWM20_RS19885 WP_001161851.1 4102606..4103847(+) (kpsS) [Escherichia coli strain Rb-23]
MQGNALTVLLSGKKYLLLQGPMGPFFRDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLVKTQVNAVYYGEMIFNKIKKD
KKDCIMLSKKTSQ

Nucleotide

• Length: 1242 bp

>NTDB_id=78150 MWM20_RS19885 WP_001161851.1 4102606..4103847(+) (kpsS) [Escherichia coli strain Rb-23]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTACAGGGGCCAATGGGACCCTTTTTCAG
AGATGTTGCCGAGTGGCTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGTGGTGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCCTACTACCAAACGCCGAAAGAGTTTCCTGGTTGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGGCGGAGTAAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTCCGTGCGTACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAATGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGTCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCGCGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGAGTCATTTATGTGCATGATCTCCCGATGCCGGAATTATTACGCCACGCAAAAGCAGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCGTTGATTCATAATAAACCACTTAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGCTTAACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGGTGAAGACCCAGGTTAATGCGGTTTATTATGGGGAGATGATTTTTAACAAGATAAAAAAAGAT
AAAAAAGATTGTATTATGCTATCAAAAAAAACATCACAATGA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.394	95.884	0.378