Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   OSR41_RS13020 Genome accession   NZ_CP116941
Coordinates   2519070..2519870 (-) Length   266 a.a.
NCBI ID   WP_003183361.1    Uniprot ID   -
Organism   Bacillus licheniformis strain GN02     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2514070..2524870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSR41_RS12985 (OSR41_12985) - 2515261..2515515 (+) 255 WP_003183348.1 DUF2627 domain-containing protein -
  OSR41_RS12990 (OSR41_12990) - 2515566..2516291 (-) 726 WP_075178205.1 glycerophosphodiester phosphodiesterase -
  OSR41_RS12995 (OSR41_12995) - 2516425..2517045 (-) 621 WP_044822591.1 N-acetylmuramoyl-L-alanine amidase family protein -
  OSR41_RS13000 (OSR41_13000) - 2517081..2517401 (-) 321 WP_034291702.1 hypothetical protein -
  OSR41_RS13005 (OSR41_13005) - 2517400..2517645 (+) 246 WP_021837567.1 hypothetical protein -
  OSR41_RS13010 (OSR41_13010) - 2517889..2518272 (-) 384 WP_003183357.1 serine O-acetyltransferase -
  OSR41_RS13015 (OSR41_13015) - 2518401..2518697 (-) 297 WP_003183359.1 antimicrobial peptide LCI -
  OSR41_RS13020 (OSR41_13020) spo0A 2519070..2519870 (-) 801 WP_003183361.1 sporulation transcription factor Spo0A Regulator
  OSR41_RS13025 (OSR41_13025) spoIVB 2520160..2521476 (-) 1317 WP_044051837.1 SpoIVB peptidase -
  OSR41_RS13030 (OSR41_13030) recN 2521626..2523356 (-) 1731 WP_003183366.1 DNA repair protein RecN Machinery gene
  OSR41_RS13035 (OSR41_13035) ahrC 2523388..2523837 (-) 450 WP_003183369.1 transcriptional regulator AhrC/ArgR -
  OSR41_RS13040 (OSR41_13040) - 2524003..2524848 (-) 846 WP_003183371.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29541.06 Da        Isoelectric Point: 6.6109

>NTDB_id=781433 OSR41_RS13020 WP_003183361.1 2519070..2519870(-) (spo0A) [Bacillus licheniformis strain GN02]
MEKIKVCVADDNRELVGLLSEYIEGQSDMEVLGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQLTHRAPSSQSSVLRPQPESPKKNLDASITTII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=781433 OSR41_RS13020 WP_003183361.1 2519070..2519870(-) (spo0A) [Bacillus licheniformis strain GN02]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGCGAATATATCGAGGGACAGAG
CGACATGGAAGTGCTTGGTGTCGCATACAACGGACAGGAATGCCTTTCTTTGTTTAAAGACAAGGAGCCCGACGTGCTTG
TGCTGGATATAATCATGCCTCATCTCGACGGATTGGCCGTTCTTGAAAGGCTGAGGGAATCGCAGCTTAAAAAGCAGCCG
AATGTCATCATGCTGACGGCGTTCGGCCAGGAAGACGTGACCAAAAAAGCTGTAGATTTAGGCGCGTCGTATTTTATTTT
GAAGCCTTTTGACATGGAGAATTTAGTCGGACATATCCGCCAGGTCAGCGGAAACGGATCTCAATTGACACACCGTGCCC
CGTCCTCTCAAAGCAGTGTGCTTCGGCCGCAGCCTGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGACCATCATC
CACGAAATCGGCGTACCTGCTCATATTAAAGGCTATTTGTACTTAAGAGAAGCCATCTCCATGGTATATAACGACATCGA
ACTGCTCGGCAGCATTACAAAAGTGCTTTATCCGGATATCGCCAAAAAATTCAACACGACTGCAAGCCGCGTCGAACGGG
CGATTCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCGATTTCGTCACTTTTCGGCTACACAGTCAGC
ATGTCAAAAGCAAAGCCGACCAATAGTGAGTTCATCGCGATGGTCGCAGACAAGCTGAGACTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.135

100

0.925