Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   OSR41_RS08240 Genome accession   NZ_CP116941
Coordinates   1603403..1603993 (+) Length   196 a.a.
NCBI ID   WP_075178168.1    Uniprot ID   -
Organism   Bacillus licheniformis strain GN02     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1598403..1608993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSR41_RS08210 (OSR41_08210) - 1598709..1599161 (+) 453 WP_011197942.1 flavodoxin -
  OSR41_RS08215 (OSR41_08215) dapD 1599267..1599977 (+) 711 WP_003181319.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  OSR41_RS08220 (OSR41_08220) - 1600046..1601170 (+) 1125 WP_003181321.1 N-acetyldiaminopimelate deacetylase -
  OSR41_RS08225 (OSR41_08225) - 1601233..1601478 (+) 246 WP_003181323.1 YkuS family protein -
  OSR41_RS08230 (OSR41_08230) ahpA 1601773..1602315 (+) 543 WP_003181325.1 biofilm-specific peroxidase AhpA -
  OSR41_RS08235 (OSR41_08235) - 1602397..1602855 (+) 459 WP_003181327.1 TlpA family protein disulfide reductase -
  OSR41_RS08240 (OSR41_08240) rok 1603403..1603993 (+) 591 WP_075178168.1 transcriptional regulator Rok Regulator
  OSR41_RS08245 (OSR41_08245) - 1604139..1605095 (-) 957 WP_009328583.1 hypothetical protein -
  OSR41_RS08250 (OSR41_08250) mobA 1605248..1605835 (+) 588 WP_003181331.1 molybdenum cofactor guanylyltransferase -
  OSR41_RS08255 (OSR41_08255) - 1605941..1606954 (+) 1014 WP_011197943.1 molybdopterin-synthase adenylyltransferase MoeB -
  OSR41_RS08260 (OSR41_08260) glp 1606974..1608266 (+) 1293 WP_003181335.1 gephyrin-like molybdotransferase Glp -
  OSR41_RS08265 (OSR41_08265) mobB 1608233..1608760 (+) 528 WP_073425595.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 196 a.a.        Molecular weight: 22692.69 Da        Isoelectric Point: 10.0936

>NTDB_id=781424 OSR41_RS08240 WP_075178168.1 1603403..1603993(+) (rok) [Bacillus licheniformis strain GN02]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDKKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
QQQPQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPN
MTTFMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 591 bp        

>NTDB_id=781424 OSR41_RS08240 WP_075178168.1 1603403..1603993(+) (rok) [Bacillus licheniformis strain GN02]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTAGAGCAGCTGAACGAGGCTGAAGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAACATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATAAAAAAAAAGATTTTC
GCCCGGAGCGTAAAACTGAATCTCTCCCTGTTTTAGCTGAATTGGCTGCACAGGAGATGAAGAGCTACCAGCAACAGCAG
CAACAGCAGCCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGA
TGGAACGACAAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAATTGCGTGAAGCGGCGATTAAAACAT
TAAAACGCCATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAAT
ATGACAACCTTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGG
TGAGATTTCTACTGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.77

97.449

0.816