Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QZH48_RS10705 Genome accession   NZ_CP129879
Coordinates   2203002..2203772 (-) Length   256 a.a.
NCBI ID   WP_004254655.1    Uniprot ID   Q9CE51
Organism   Lactococcus lactis subsp. lactis strain CAB701     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2198002..2208772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QZH48_RS10680 (QZH48_10680) - 2199063..2199470 (+) 408 WP_301675704.1 hypothetical protein -
  QZH48_RS10685 (QZH48_10685) - 2199571..2199876 (+) 306 WP_021721760.1 bacteriocin immunity protein -
  QZH48_RS10690 (QZH48_10690) - 2199965..2201115 (+) 1151 Protein_2074 tyrosine-type recombinase/integrase -
  QZH48_RS10695 (QZH48_10695) - 2201328..2201954 (+) 627 WP_146978268.1 copper homeostasis protein CutC -
  QZH48_RS10700 (QZH48_10700) - 2201990..2203009 (-) 1020 WP_118263602.1 ABC transporter permease -
  QZH48_RS10705 (QZH48_10705) pptA 2203002..2203772 (-) 771 WP_004254655.1 ABC transporter ATP-binding protein Regulator
  QZH48_RS10710 (QZH48_10710) - 2203791..2205596 (-) 1806 WP_038602223.1 glycerophosphoryl diester phosphodiesterase membrane domain-containing protein -
  QZH48_RS10715 (QZH48_10715) - 2205875..2206276 (+) 402 WP_038602226.1 HIT family protein -
  QZH48_RS10720 (QZH48_10720) - 2206289..2206510 (+) 222 WP_021721766.1 hypothetical protein -
  QZH48_RS10725 (QZH48_10725) - 2206522..2206866 (-) 345 WP_015427109.1 hypothetical protein -
  QZH48_RS10730 (QZH48_10730) rplA 2206946..2207635 (-) 690 WP_004254644.1 50S ribosomal protein L1 -
  QZH48_RS10735 (QZH48_10735) rplK 2207932..2208357 (-) 426 WP_011677074.1 50S ribosomal protein L11 -

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 28472.99 Da        Isoelectric Point: 4.5320

>NTDB_id=781222 QZH48_RS10705 WP_004254655.1 2203002..2203772(-) (pptA) [Lactococcus lactis subsp. lactis strain CAB701]
MLKVTNLTGGYLGHPVLKDLNFEIKEGELVGLIGLNGAGKSTTIQEIIGLLTPYSGQIELDGLTLQQDLEGYRRKIGFIP
ETPSLYEELTLREHIEVTALAYGISVDLAFERAEKLLETFRLSDKLDWFPVNFSKGMKQKVMIICAFLVEPSLYIVDEPF
MGLDPLAIQDLIDLMIDMKKSGSSILMSTHILSTAEKFCDKFIVLHEGQVVAFGTVEELRTQFNQPKASLDEIYLALTKG
NIPNSKEVVEAGKSNE

Nucleotide


Download         Length: 771 bp        

>NTDB_id=781222 QZH48_RS10705 WP_004254655.1 2203002..2203772(-) (pptA) [Lactococcus lactis subsp. lactis strain CAB701]
ATGTTAAAAGTAACAAATCTAACAGGTGGCTATTTGGGGCATCCTGTCTTAAAAGACCTTAATTTTGAAATTAAAGAAGG
TGAGTTAGTTGGACTCATTGGTTTAAATGGGGCAGGAAAATCGACAACAATTCAAGAAATTATTGGACTTTTGACTCCTT
ATTCTGGACAAATTGAATTAGACGGCTTAACTTTACAACAAGATTTAGAAGGCTATCGTAGAAAAATTGGTTTCATTCCA
GAAACACCAAGTTTATATGAAGAATTGACTTTGCGTGAACATATTGAAGTGACAGCTTTAGCTTACGGGATTTCTGTTGA
CTTGGCTTTTGAACGTGCTGAAAAATTATTAGAAACTTTCCGCTTGAGTGATAAATTAGATTGGTTCCCTGTGAATTTTT
CAAAAGGGATGAAACAAAAAGTGATGATTATCTGCGCATTCTTAGTGGAACCTTCGCTCTATATTGTTGATGAACCTTTT
ATGGGACTTGATCCGCTTGCAATTCAGGATTTGATTGACTTGATGATTGACATGAAAAAATCAGGAAGTTCGATTTTAAT
GAGTACACATATCTTGTCCACAGCTGAAAAATTCTGTGATAAATTTATTGTTTTGCATGAAGGTCAAGTTGTTGCTTTTG
GAACAGTAGAAGAATTACGGACTCAATTTAATCAGCCTAAGGCAAGTTTAGATGAAATTTATCTTGCCTTAACAAAAGGA
AATATTCCAAACTCTAAAGAAGTTGTAGAGGCAGGAAAGTCAAATGAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CE51

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

67.355

94.531

0.637
  pptA Streptococcus thermophilus LMD-9

66.942

94.531

0.633