Detailed information NTG0078077

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MWM15_RS22820
• Genome accession: NZ_AP025675
• Coordinates: 4788337..4789362 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Rb-3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4783337..4794362

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWM15_RS22800 (TRECRb3_43790)	metJ	4784522..4784839 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MWM15_RS22805 (TRECRb3_43800)	yiiX	4784899..4785507 (+)	609	WP_000702297.1	YiiX family permuted papain-like enzyme	-
MWM15_RS22810 (TRECRb3_43810)	rpmE	4785568..4785780 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MWM15_RS22815 (TRECRb3_43820)	priA	4785983..4788181 (+)	2199	WP_001298416.1	primosomal protein N'	Machinery gene
MWM15_RS22820 (TRECRb3_43830)	cytR	4788337..4789362 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MWM15_RS22825 (TRECRb3_43840)	ftsN	4789454..4790413 (+)	960	WP_000068847.1	cell division protein FtsN	-
MWM15_RS22830 (TRECRb3_43850)	hslV	4790506..4791036 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MWM15_RS22835 (TRECRb3_43860)	hslU	4791046..4792377 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MWM15_RS22840 (TRECRb3_43870)	menA	4792444..4793370 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MWM15_RS22845 (TRECRb3_43880)	rraA	4793463..4793948 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MWM15_RS22850 (TRECRb3_43890)	zapB	4794033..4794278 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=78077 MWM15_RS22820 WP_000644904.1 4788337..4789362(+) (cytR) [Escherichia coli strain Rb-3]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=78077 MWM15_RS22820 WP_000644904.1 4788337..4789362(+) (cytR) [Escherichia coli strain Rb-3]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628