Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   PPM45_RS07515 Genome accession   NZ_CP116870
Coordinates   1439068..1439643 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain Master_strain     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1434068..1444643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM45_RS07485 dapD 1434254..1434964 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  PPM45_RS07490 dapI 1435034..1436158 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  PPM45_RS07495 ykuS 1436220..1436465 (+) 246 WP_003232382.1 YkuS family protein -
  PPM45_RS07500 mscT 1436502..1437305 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  PPM45_RS07505 ahpA 1437542..1438084 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  PPM45_RS07510 ykuV 1438156..1438602 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  PPM45_RS07515 rok 1439068..1439643 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  PPM45_RS07520 cse15 1439684..1440649 (-) 966 WP_003245018.1 spore protein Cse15 -
  PPM45_RS07525 mobA 1440786..1441385 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  PPM45_RS07530 moeB 1441436..1442455 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  PPM45_RS07535 glp 1442473..1443765 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  PPM45_RS07540 mobB 1443726..1444247 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=780706 PPM45_RS07515 WP_003232378.1 1439068..1439643(+) (rok) [Bacillus subtilis subsp. subtilis strain Master_strain]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=780706 PPM45_RS07515 WP_003232378.1 1439068..1439643(+) (rok) [Bacillus subtilis subsp. subtilis strain Master_strain]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1