Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   PPM45_RS04605 Genome accession   NZ_CP116870
Coordinates   905131..905925 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis subsp. subtilis strain Master_strain     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 900131..910925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM45_RS04575 sxzA 900970..902001 (+) 1032 WP_003243057.1 FecCD family ABC transporter permease -
  PPM45_RS04580 yfhB 902116..902997 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  PPM45_RS04585 yfhC 903085..903669 (+) 585 WP_003243940.1 nitroreductase family protein -
  PPM45_RS04590 yfhD 903708..903899 (-) 192 WP_003233561.1 YfhD family protein -
  PPM45_RS04595 yfhE 903966..904076 (-) 111 WP_003223230.1 YfhE family protein -
  PPM45_RS04600 yfhF 904131..905042 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  PPM45_RS04605 recX 905131..905925 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  PPM45_RS04610 yfhH 905927..906241 (+) 315 WP_003244592.1 YfhH family protein -
  PPM45_RS04615 yfhI 906384..907577 (+) 1194 WP_003243500.1 MFS transporter -
  PPM45_RS04620 sspK 907610..907762 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  PPM45_RS04625 yfhJ 907887..908156 (+) 270 WP_003243789.1 YfhJ family protein -
  PPM45_RS04630 yfhK 908301..908819 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  PPM45_RS04635 spdL 908904..909236 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  PPM45_RS04640 ephM 909223..910083 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=780688 PPM45_RS04605 WP_003243354.1 905131..905925(+) (recX) [Bacillus subtilis subsp. subtilis strain Master_strain]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=780688 PPM45_RS04605 WP_003243354.1 905131..905925(+) (recX) [Bacillus subtilis subsp. subtilis strain Master_strain]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1