Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PPM45_RS02195 Genome accession   NZ_CP116870
Coordinates   432379..433329 (+) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis subsp. subtilis strain Master_strain     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 427379..438329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM45_RS02170 rapC 428838..429986 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  PPM45_RS02175 phrC 429970..430092 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  PPM45_RS02180 yczM 430192..430281 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  PPM45_RS02185 yczN 430363..430476 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  PPM45_RS02190 thrD 430630..431994 (-) 1365 WP_009966541.1 aspartate kinase -
  PPM45_RS02195 ceuB 432379..433329 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  PPM45_RS02200 yclO 433322..434269 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  PPM45_RS02205 yclP 434263..435021 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  PPM45_RS02210 yclQ 435043..435996 (+) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  PPM45_RS02215 cdaE 436043..437461 (-) 1419 WP_003246604.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=780681 PPM45_RS02195 WP_003234491.1 432379..433329(+) (ceuB) [Bacillus subtilis subsp. subtilis strain Master_strain]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=780681 PPM45_RS02195 WP_003234491.1 432379..433329(+) (ceuB) [Bacillus subtilis subsp. subtilis strain Master_strain]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522