Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   PPM34_RS05605 Genome accession   NZ_CP116869
Coordinates   1080409..1081065 (+) Length   218 a.a.
NCBI ID   WP_003245194.1    Uniprot ID   A0AAE2VF25
Organism   Bacillus subtilis subsp. subtilis strain MGP001     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1075409..1086065
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM34_RS05575 oppF 1075874..1076791 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  PPM34_RS05580 yjbB 1076898..1078115 (+) 1218 WP_010886478.1 MFS transporter -
  PPM34_RS05585 yjbC 1078279..1078857 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  PPM34_RS05590 spx 1079038..1079433 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  PPM34_RS05595 yjbE 1079476..1080132 (-) 657 WP_003232944.1 TerC family protein -
  PPM34_RS05600 - 1080302..1080442 (+) 141 WP_119122854.1 hypothetical protein -
  PPM34_RS05605 mecA 1080409..1081065 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  PPM34_RS05610 - 1081060..1081182 (-) 123 WP_003245684.1 hypothetical protein -
  PPM34_RS05615 coiA 1081256..1082377 (+) 1122 WP_010886479.1 competence protein CoiA Machinery gene
  PPM34_RS05620 pepF 1082607..1084436 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  PPM34_RS05625 - 1084474..1084641 (-) 168 WP_003244944.1 hypothetical protein -
  PPM34_RS05630 spxH 1084955..1085854 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25763.69 Da        Isoelectric Point: 4.1174

>NTDB_id=780615 PPM34_RS05605 WP_003245194.1 1080409..1081065(+) (mecA) [Bacillus subtilis subsp. subtilis strain MGP001]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=780615 PPM34_RS05605 WP_003245194.1 1080409..1081065(+) (mecA) [Bacillus subtilis subsp. subtilis strain MGP001]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

100

100

1