Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PPM34_RS01565 Genome accession   NZ_CP116869
Coordinates   304228..305178 (+) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis subsp. subtilis strain MGP001     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 299228..310178
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM34_RS01540 rapC 300687..301835 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  PPM34_RS01545 phrC 301819..301941 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  PPM34_RS01550 yczM 302041..302130 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  PPM34_RS01555 yczN 302212..302325 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  PPM34_RS01560 thrD 302479..303843 (-) 1365 WP_009966541.1 aspartate kinase -
  PPM34_RS01565 ceuB 304228..305178 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  PPM34_RS01570 yclO 305171..306118 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  PPM34_RS01575 yclP 306112..306870 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  PPM34_RS01580 yclQ 306892..307845 (+) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  PPM34_RS01585 cdaE 307892..309310 (-) 1419 WP_003246604.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=780596 PPM34_RS01565 WP_003234491.1 304228..305178(+) (ceuB) [Bacillus subtilis subsp. subtilis strain MGP001]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=780596 PPM34_RS01565 WP_003234491.1 304228..305178(+) (ceuB) [Bacillus subtilis subsp. subtilis strain MGP001]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522