Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QYT36_RS12725 Genome accession   NZ_CP129562
Coordinates   2572338..2573012 (-) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain 316M     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2567338..2578012
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYT36_RS12710 (QYT36_12750) vraG 2568521..2570410 (-) 1890 WP_000143615.1 ABC transporter permease VraG -
  QYT36_RS12715 (QYT36_12755) vraF 2570400..2571161 (-) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  QYT36_RS12720 (QYT36_12760) graS 2571305..2572345 (-) 1041 WP_001061264.1 histidine kinase GraS/ApsS -
  QYT36_RS12725 (QYT36_12765) braR 2572338..2573012 (-) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  QYT36_RS12730 (QYT36_12770) graX 2573028..2573951 (-) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  QYT36_RS12735 (QYT36_12775) - 2574064..2574570 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  QYT36_RS12740 (QYT36_12780) - 2574779..2575207 (-) 429 WP_000198504.1 hypothetical protein -
  QYT36_RS12745 (QYT36_12785) - 2575536..2576579 (-) 1044 WP_001030772.1 alpha/beta hydrolase -
  QYT36_RS12750 (QYT36_12790) - 2576730..2577797 (-) 1068 WP_000980137.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=780533 QYT36_RS12725 WP_001166500.1 2572338..2573012(-) (braR) [Staphylococcus aureus strain 316M]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=780533 QYT36_RS12725 WP_001166500.1 2572338..2573012(-) (braR) [Staphylococcus aureus strain 316M]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGTTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCTTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397