Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   PPM66_RS03950 Genome accession   NZ_CP116867
Coordinates   774449..775243 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis subsp. subtilis strain MGP008     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 769449..780243
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM66_RS03920 sxzA 770288..771319 (+) 1032 WP_003243057.1 FecCD family ABC transporter permease -
  PPM66_RS03925 yfhB 771434..772315 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  PPM66_RS03930 yfhC 772403..772987 (+) 585 WP_003243940.1 nitroreductase family protein -
  PPM66_RS03935 yfhD 773026..773217 (-) 192 WP_003233561.1 YfhD family protein -
  PPM66_RS03940 yfhE 773284..773394 (-) 111 WP_003223230.1 YfhE family protein -
  PPM66_RS03945 yfhF 773449..774360 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  PPM66_RS03950 recX 774449..775243 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  PPM66_RS03955 yfhH 775245..775559 (+) 315 WP_003244592.1 YfhH family protein -
  PPM66_RS03960 yfhI 775702..776895 (+) 1194 WP_003243500.1 MFS transporter -
  PPM66_RS03965 sspK 776928..777080 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  PPM66_RS03970 yfhJ 777205..777474 (+) 270 WP_003243789.1 YfhJ family protein -
  PPM66_RS03975 yfhK 777619..778137 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  PPM66_RS03980 spdL 778222..778554 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  PPM66_RS03985 ephM 778541..779401 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=780435 PPM66_RS03950 WP_003243354.1 774449..775243(+) (recX) [Bacillus subtilis subsp. subtilis strain MGP008]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=780435 PPM66_RS03950 WP_003243354.1 774449..775243(+) (recX) [Bacillus subtilis subsp. subtilis strain MGP008]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1