Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   PNF29_RS16740 Genome accession   NZ_CP116773
Coordinates   3133084..3133878 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain SRCM125727     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3128084..3138878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PNF29_RS16705 (PNF29_16705) spdL 3128483..3128815 (-) 333 WP_024573182.1 SdpC immunity protein SpdL -
  PNF29_RS16710 (PNF29_16710) yfhK 3128900..3129418 (-) 519 WP_003243363.1 SH3 domain-containing protein -
  PNF29_RS16720 (PNF29_16720) yfhJ 3130853..3131122 (-) 270 WP_003243789.1 YfhJ family protein -
  PNF29_RS16725 (PNF29_16725) sspK 3131247..3131399 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  PNF29_RS16730 (PNF29_16730) yfhI 3131432..3132625 (-) 1194 WP_144454100.1 MFS transporter -
  PNF29_RS16735 (PNF29_16735) yfhH 3132768..3133082 (-) 315 WP_003244592.1 YfhH family protein -
  PNF29_RS16740 (PNF29_16740) recX 3133084..3133878 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  PNF29_RS16745 (PNF29_16745) yfhF 3133967..3134878 (+) 912 WP_272515650.1 TIGR01777 family oxidoreductase -
  PNF29_RS16750 (PNF29_16750) yfhE 3134933..3135043 (+) 111 WP_003223230.1 YfhE family protein -
  PNF29_RS16755 (PNF29_16755) yfhD 3135110..3135301 (+) 192 WP_003233561.1 YfhD family protein -
  PNF29_RS16760 (PNF29_16760) yfhC 3135340..3135924 (-) 585 WP_272515651.1 nitroreductase family protein -
  PNF29_RS16765 (PNF29_16765) yfhB 3136012..3136893 (-) 882 WP_041332789.1 PhzF family phenazine biosynthesis isomerase -
  PNF29_RS16770 (PNF29_16770) sxzA 3137008..3138039 (-) 1032 WP_003243057.1 FecCD family ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=780138 PNF29_RS16740 WP_003243354.1 3133084..3133878(-) (recX) [Bacillus subtilis strain SRCM125727]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=780138 PNF29_RS16740 WP_003243354.1 3133084..3133878(-) (recX) [Bacillus subtilis strain SRCM125727]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1