Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   PNF29_RS15025 Genome accession   NZ_CP116773
Coordinates   2815555..2816211 (-) Length   218 a.a.
NCBI ID   WP_003232942.1    Uniprot ID   A0AAQ3ENL6
Organism   Bacillus subtilis strain SRCM125727     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2810555..2821211
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PNF29_RS15000 (PNF29_15000) spxH 2810766..2811665 (+) 900 WP_041340381.1 protease adaptor protein SpxH -
  PNF29_RS15005 (PNF29_15005) - 2811979..2812146 (+) 168 WP_003244944.1 hypothetical protein -
  PNF29_RS15010 (PNF29_15010) pepF 2812184..2814013 (-) 1830 WP_171518460.1 oligoendopeptidase F -
  PNF29_RS15015 (PNF29_15015) coiA 2814243..2815364 (-) 1122 WP_250540020.1 competence protein CoiA Machinery gene
  PNF29_RS15020 (PNF29_15020) - 2815438..2815560 (+) 123 WP_003232940.1 hypothetical protein -
  PNF29_RS15025 (PNF29_15025) mecA 2815555..2816211 (-) 657 WP_003232942.1 adaptor protein MecA Regulator
  PNF29_RS15030 (PNF29_15030) - 2816178..2816318 (-) 141 WP_119122854.1 hypothetical protein -
  PNF29_RS15035 (PNF29_15035) yjbE 2816488..2817144 (+) 657 WP_003232944.1 TerC family protein -
  PNF29_RS15040 (PNF29_15040) spx 2817399..2817794 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  PNF29_RS15045 (PNF29_15045) yjbC 2817975..2818553 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  PNF29_RS15050 (PNF29_15050) yjbB 2818718..2819935 (-) 1218 WP_272516191.1 MFS transporter -
  PNF29_RS15055 (PNF29_15055) oppF 2820041..2820958 (-) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25762.62 Da        Isoelectric Point: 4.0841

>NTDB_id=780126 PNF29_RS15025 WP_003232942.1 2815555..2816211(-) (mecA) [Bacillus subtilis strain SRCM125727]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=780126 PNF29_RS15025 WP_003232942.1 2815555..2816211(-) (mecA) [Bacillus subtilis strain SRCM125727]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTTGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.083

100

0.991