Detailed information NTG0780031

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: PND17_RS02640
• Genome accession: NZ_CP116772
• Coordinates: 505186..506067 (-)
• Length: 293 a.a.
• NCBI ID: WP_271298197.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain strain TSGB 4141
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 500186..511067

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PND17_RS02615 (PND17_02615)	vicR	500891..501598 (-)	708	WP_173940375.1	response regulator YycF	Regulator
PND17_RS02620 (PND17_02620)	-	502125..502892 (+)	768	WP_011227275.1	amino acid ABC transporter ATP-binding protein	-
PND17_RS02625 (PND17_02625)	-	502904..503737 (+)	834	WP_232975083.1	transporter substrate-binding domain-containing protein	-
PND17_RS02630 (PND17_02630)	-	503755..504453 (+)	699	WP_271298507.1	amino acid ABC transporter permease	-
PND17_RS02635 (PND17_02635)	-	504465..505115 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
PND17_RS02640 (PND17_02640)	endA	505186..506067 (-)	882	WP_271298197.1	DNA/RNA non-specific endonuclease	Machinery gene
PND17_RS02645 (PND17_02645)	-	506129..506317 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
PND17_RS02650 (PND17_02650)	murA	506319..507590 (-)	1272	WP_179970494.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
PND17_RS02655 (PND17_02655)	-	507660..507896 (-)	237	WP_002946959.1	DUF1146 family protein	-
PND17_RS02660 (PND17_02660)	galE	508084..509097 (-)	1014	WP_179971944.1	UDP-glucose 4-epimerase GalE	-
PND17_RS02665 (PND17_02665)	-	509057..509314 (-)	258	WP_271298196.1	hypothetical protein	-
PND17_RS02670 (PND17_02670)	-	509330..509728 (-)	399	WP_333781041.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31730.48 Da
• Isoelectric Point: 10.1789

>NTDB_id=780031 PND17_RS02640 WP_271298197.1 505186..506067(-) (endA) [Streptococcus thermophilus strain strain TSGB 4141]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDSPIRQVASLVAGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=780031 PND17_RS02640 WP_271298197.1 505186..506067(-) (endA) [Streptococcus thermophilus strain strain TSGB 4141]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAGTCCTATCAGACAAGTAGCAAGCCTAGTTGCAGGTAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594