Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QYT32_RS06095 Genome accession   NZ_CP129553
Coordinates   1237573..1238247 (-) Length   224 a.a.
NCBI ID   WP_001166499.1    Uniprot ID   Q6GJ11
Organism   Staphylococcus aureus strain 704D     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1232573..1243247
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYT32_RS06080 (QYT32_06070) - 1233753..1235642 (-) 1890 WP_000009408.1 FtsX-like permease family protein -
  QYT32_RS06085 (QYT32_06075) vraF 1235632..1236393 (-) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  QYT32_RS06090 (QYT32_06080) graS 1236540..1237580 (-) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  QYT32_RS06095 (QYT32_06085) braR 1237573..1238247 (-) 675 WP_001166499.1 response regulator transcription factor GraR/ApsR Regulator
  QYT32_RS06100 (QYT32_06090) graX 1238263..1239186 (-) 924 WP_000802949.1 auxiliary protein GraX/ApsX -
  QYT32_RS06105 (QYT32_06095) - 1239299..1239805 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  QYT32_RS06110 (QYT32_06100) - 1240003..1240431 (-) 429 WP_000198502.1 hypothetical protein -
  QYT32_RS06115 (QYT32_06105) - 1240759..1241802 (-) 1044 WP_001030763.1 alpha/beta hydrolase -
  QYT32_RS06120 (QYT32_06110) - 1241953..1243020 (-) 1068 WP_000980141.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.3968

>NTDB_id=779985 QYT32_RS06095 WP_001166499.1 1237573..1238247(-) (braR) [Staphylococcus aureus strain 704D]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVIDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=779985 QYT32_RS06095 WP_001166499.1 1237573..1238247(-) (braR) [Staphylococcus aureus strain 704D]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CTGTCATTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATTTTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGGGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q6GJ11

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.364

98.214

0.406