Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QYT32_RS00270 Genome accession   NZ_CP129553
Coordinates   32226..32966 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 704D     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 27226..37966
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYT32_RS00245 (QYT32_00240) yhaM 27644..28585 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  QYT32_RS00250 (QYT32_00245) - 28706..29668 (-) 963 WP_000782130.1 foldase protein PrsA -
  QYT32_RS00255 (QYT32_00250) - 29873..30430 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  QYT32_RS00260 (QYT32_00255) - 31163..31528 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  QYT32_RS00265 (QYT32_00260) - 31670..32092 (-) 423 WP_000004981.1 HIT family protein -
  QYT32_RS00270 (QYT32_00265) pptA 32226..32966 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  QYT32_RS00275 (QYT32_00270) ecsB 32959..34182 (+) 1224 WP_001245764.1 ABC transporter permease EcsB -
  QYT32_RS00280 (QYT32_00275) traP 34306..34809 (-) 504 WP_000737983.1 signal transduction protein TRAP -
  QYT32_RS00285 (QYT32_00280) - 34995..35081 (+) 87 WP_031875110.1 hypothetical protein -
  QYT32_RS00290 (QYT32_00285) hemE 35071..36108 (+) 1038 WP_000233541.1 uroporphyrinogen decarboxylase -
  QYT32_RS00295 (QYT32_00290) hemH 36166..37089 (+) 924 WP_000162875.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=779929 QYT32_RS00270 WP_000216874.1 32226..32966(+) (pptA) [Staphylococcus aureus strain 704D]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=779929 QYT32_RS00270 WP_000216874.1 32226..32966(+) (pptA) [Staphylococcus aureus strain 704D]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATATACGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545