Detailed information NTG0077989

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M2084_RS22275
• Genome accession: NZ_AP025662
• Coordinates: 4662986..4664011 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain TUM20902
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4657986..4669011

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2084_RS22255 (TUM20902_42590)	metJ	4659171..4659488 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M2084_RS22260 (TUM20902_42600)	yiiX	4659548..4660156 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
M2084_RS22265 (TUM20902_42610)	rpmE	4660217..4660429 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M2084_RS22270 (TUM20902_42620)	priA	4660632..4662830 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
M2084_RS22275 (TUM20902_42630)	cytR	4662986..4664011 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
M2084_RS22280 (TUM20902_42640)	ftsN	4664103..4665062 (+)	960	WP_000068844.1	cell division protein FtsN	-
M2084_RS22285 (TUM20902_42650)	hslV	4665155..4665685 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M2084_RS22290 (TUM20902_42660)	hslU	4665695..4667026 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
M2084_RS22295 (TUM20902_42670)	menA	4667093..4668019 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M2084_RS22300 (TUM20902_42680)	rraA	4668112..4668597 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=77989 M2084_RS22275 WP_000644904.1 4662986..4664011(+) (cytR) [Escherichia coli strain TUM20902]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=77989 M2084_RS22275 WP_000644904.1 4662986..4664011(+) (cytR) [Escherichia coli strain TUM20902]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628