Detailed information NTG0779886

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: QY866_RS06145
• Genome accession: NZ_CP129530
• Coordinates: 1224386..1225432 (+)
• Length: 348 a.a.
• NCBI ID: WP_056946687.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain A1262
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1219386..1230432

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QY866_RS06115 (QY866_06105)	-	1220410..1220706 (+)	297	WP_337457548.1	DUF1507 family protein	-
QY866_RS06120 (QY866_06110)	-	1220715..1221902 (+)	1188	WP_011374777.1	FtsW/RodA/SpoVE family cell cycle protein	-
QY866_RS06125 (QY866_06115)	-	1221913..1223001 (+)	1089	WP_099947354.1	CAP-associated domain-containing protein	-
QY866_RS06130 (QY866_06120)	-	1223025..1223315 (+)	291	WP_076632420.1	YlbG family protein	-
QY866_RS06135 (QY866_06125)	rsmD	1223320..1223874 (+)	555	WP_011374774.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QY866_RS06140 (QY866_06130)	coaD	1223887..1224384 (+)	498	WP_011374773.1	pantetheine-phosphate adenylyltransferase	-
QY866_RS06145 (QY866_06135)	sepM	1224386..1225432 (+)	1047	WP_056946687.1	SepM family pheromone-processing serine protease	Regulator
QY866_RS06150 (QY866_06140)	comEA	1225504..1226211 (+)	708	WP_231952379.1	helix-hairpin-helix domain-containing protein	Machinery gene
QY866_RS06155 (QY866_06145)	-	1226269..1226757 (+)	489	WP_011374770.1	ComE operon protein 2	-
QY866_RS06160 (QY866_06150)	comEC	1226754..1229021 (+)	2268	WP_099947352.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QY866_RS06165 (QY866_06155)	holA	1229018..1230046 (+)	1029	WP_011374768.1	DNA polymerase III subunit delta	-
QY866_RS06170 (QY866_06160)	rpsT	1230115..1230369 (-)	255	WP_011374767.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38138.94 Da
• Isoelectric Point: 9.6949

>NTDB_id=779886 QY866_RS06145 WP_056946687.1 1224386..1225432(+) (sepM) [Latilactobacillus sakei strain A1262]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLGNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPRTHHPGLGITLTDHSKIETNIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRTIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=779886 QY866_RS06145 WP_056946687.1 1224386..1225432(+) (sepM) [Latilactobacillus sakei strain A1262]
ATGCCAAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACTGTTGGTGTCAGAGGTCCAGTAACACCGTTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGGCAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACCAAGGACGCATCATCCGGGCCTCGGGATTACGT
TAACAGATCATTCTAAAATCGAAACCAATATCCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTACAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGTACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACGGTCT
TTTTTGCACCGAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
CCATTAA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (207-310)

• PDZ domain (PDZ_2) (131-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	43.966	100	0.44