Detailed information NTG0779828

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: QY867_RS08400
• Genome accession: NZ_CP129529
• Coordinates: 1647202..1650054 (-)
• Length: 950 a.a.
• NCBI ID: WP_056948814.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain A1291
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1642202..1655054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QY867_RS08370 (QY867_08355)	-	1642372..1642896 (+)	525	WP_011374238.1	DsbA family protein	-
QY867_RS08375 (QY867_08360)	-	1643010..1643465 (-)	456	WP_099947267.1	MarR family transcriptional regulator	-
QY867_RS08380 (QY867_08365)	whiA	1643557..1644501 (-)	945	WP_076632188.1	DNA-binding protein WhiA	-
QY867_RS08385 (QY867_08370)	-	1644504..1645538 (-)	1035	WP_099947265.1	YvcK family protein	-
QY867_RS08390 (QY867_08375)	rapZ	1645535..1646419 (-)	885	WP_011374234.1	RNase adapter RapZ	-
QY867_RS08395 (QY867_08380)	-	1646545..1647081 (-)	537	WP_056948812.1	DUF308 domain-containing protein	-
QY867_RS08400 (QY867_08385)	uvrA	1647202..1650054 (-)	2853	WP_056948814.1	excinuclease ABC subunit UvrA	Machinery gene
QY867_RS08405 (QY867_08390)	uvrB	1650064..1652067 (-)	2004	WP_056948816.1	excinuclease ABC subunit UvrB	Machinery gene
QY867_RS08410 (QY867_08395)	-	1652275..1652907 (-)	633	WP_056948818.1	YfbR-like 5'-deoxynucleotidase	-
QY867_RS08415 (QY867_08400)	-	1653032..1654756 (-)	1725	WP_011374229.1	phospho-sugar mutase	-

Sequence

Protein

• Length: 950 a.a.
• Molecular weight: 104616.89 Da
• Isoelectric Point: 5.8710

>NTDB_id=779828 QY867_RS08400 WP_056948814.1 1647202..1650054(-) (uvrA) [Latilactobacillus sakei strain A1291]
MANDKIVIHGARAHNLKDIDVTIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGQMDKPDVDSIDG
LSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGQPICPNDGTEISSQSVEQMVDRVLALPERTKLQIMSPIVRGK
KGQHKKIFEKIQREGYVRVQVDGEVMDVSTDLELDKNKKHDINIVVDRIVVKDGVRSRLFDSFEAALRLSDGYATADVIG
GEQLLFSEHYACPICGFTVGALEPRLFSFNAPFGACPECDGLGLKLEVDTDLVVPDTSKTLREGAIAPWNPISSQYYPQM
LEQACTAFKIDMDRPFSKLTPRQKDIILNGSQGKEFHFHYENDFGGVRDVEVPFEGVLSNIDRRYRETNSDFTRTQMRTY
MTELTCQTCHGKRLNRQALAVKVGGQDIAEVSDNAIKDGLPFFDNLELSEKDQVIAKPILKEVHDRLTFLINVGLDYLTL
SRSAGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIGSLKKMRDLGNTLIVVEHDEDTMRAADYLIDI
GPGAGDLGGEVMAAGTPTEVEQNPNSLTGRYLAGQDYIPVPLKRRQGNGKKVRVTGAAENNLKDLTVDFPLGEFVAVTGV
SGSGKSTLVNTILKKALAQKMNRNSAKPGQYKTITGYQNLEKLINIDQSPIGRTPRSNPATYTGVFDNVRDLFAQTNEAK
LRGYKKGRFSFNVKGGRCEACKGDGIIKIEMNFLPDVYVPCEICHGSRYNSETLEVVYKGKNIAEILDMTVSEATEFFEN
IPKIARKLQTIVDVGLGYVTLGQSATTLSGGEAQRMKLASELQKQSTGKNLYILDEPTTGLHTDDIKRLLGVLERLVDEG
NTVLVIEHNLDVIKTADYIIDLGPEGGDKGGTIVATGTPETLVNVAESYTGRYLKPILERDTARTLAAQE

Nucleotide

• Length: 2853 bp

>NTDB_id=779828 QY867_RS08400 WP_056948814.1 1647202..1650054(-) (uvrA) [Latilactobacillus sakei strain A1291]
ATGGCAAATGATAAGATAGTAATTCACGGCGCACGCGCCCATAATTTAAAGGATATCGACGTTACGATTCCAAGAGATAA
GTTGGTGGTTATCACTGGATTATCTGGTTCTGGGAAGAGTTCGTTAGCGTTTGATACGTTATATGCAGAAGGACAACGGC
GGTATGTTGAGAGTTTATCAGCATATGCCCGTCAGTTCTTGGGGCAAATGGATAAACCGGATGTTGATTCAATTGACGGG
TTAAGTCCAGCGATTTCGATTGACCAAAAGACGACCTCTAAGAATCCACGTTCAACAGTCGGAACAGTCACTGAAATCAA
TGACTATCTCCGCTTATTGTGGGCCCGAGTTGGTCAACCCATCTGTCCCAACGATGGGACTGAAATCAGTAGCCAATCAG
TAGAACAAATGGTTGACCGGGTATTGGCTTTACCGGAGCGGACTAAACTCCAAATTATGTCACCAATCGTTCGTGGCAAA
AAAGGGCAACATAAAAAAATCTTTGAGAAGATTCAACGTGAAGGCTATGTGCGTGTTCAAGTGGATGGCGAAGTGATGGA
TGTTAGCACCGACCTAGAATTAGATAAGAATAAGAAACATGATATCAATATTGTCGTTGATCGAATTGTCGTTAAAGACG
GGGTGCGCTCACGGTTATTTGATTCATTTGAAGCAGCCTTGAGACTATCTGATGGGTATGCGACAGCCGATGTAATTGGC
GGCGAACAACTCTTGTTCTCTGAACATTATGCGTGCCCAATCTGTGGGTTTACAGTTGGGGCATTAGAACCACGGCTATT
CTCATTTAACGCGCCATTTGGGGCTTGTCCTGAATGTGATGGTTTGGGCTTAAAACTAGAAGTTGATACAGACCTCGTTG
TGCCGGATACAAGTAAAACATTGCGTGAAGGGGCGATTGCACCTTGGAACCCAATCAGTTCGCAATACTACCCACAAATG
TTAGAACAAGCTTGCACGGCCTTTAAAATTGATATGGACCGTCCTTTCAGTAAGTTGACACCTCGTCAAAAAGATATCAT
CTTAAACGGCTCACAAGGCAAAGAATTCCACTTCCATTATGAAAATGATTTTGGGGGCGTTCGCGATGTTGAAGTGCCTT
TTGAAGGGGTCCTCAGCAATATTGATCGGCGTTATCGTGAAACGAATAGTGATTTCACACGGACGCAGATGCGCACTTAT
ATGACGGAATTAACGTGTCAAACGTGTCACGGGAAGCGACTAAATCGCCAAGCTTTGGCGGTTAAAGTCGGTGGCCAAGA
TATCGCTGAAGTCTCAGACAATGCGATCAAAGATGGCCTTCCATTCTTCGATAACCTTGAACTTTCTGAAAAAGATCAAG
TGATTGCGAAACCCATTTTGAAAGAAGTTCATGACCGCCTAACTTTCTTGATTAATGTCGGCTTAGACTATTTGACGTTG
AGTCGTTCTGCTGGCACGCTTTCCGGTGGGGAAGCGCAACGGATTCGTTTGGCCACGCAAATTGGGTCGAACTTATCTGG
CGTGCTTTACATCTTAGACGAACCTTCAATTGGGTTGCATCAACGTGATAATGACCGGTTAATCGGTTCTTTGAAGAAGA
TGCGCGATTTAGGGAACACCTTAATCGTGGTTGAACATGATGAAGATACGATGCGAGCAGCCGATTACCTAATTGATATT
GGCCCAGGTGCTGGGGACCTTGGCGGAGAAGTGATGGCCGCTGGGACACCCACGGAAGTCGAACAAAACCCTAATTCCTT
AACAGGCCGTTATTTAGCGGGGCAGGATTATATTCCGGTACCATTAAAACGGCGTCAAGGAAATGGTAAAAAGGTGCGGG
TAACTGGCGCTGCTGAAAATAATTTAAAAGATTTAACGGTTGATTTTCCATTAGGTGAATTTGTCGCCGTGACCGGAGTT
TCTGGATCGGGTAAATCAACATTAGTGAATACGATTTTGAAGAAGGCGCTTGCGCAAAAGATGAATCGTAATTCAGCTAA
ACCGGGGCAGTATAAGACTATCACGGGTTATCAAAATCTTGAGAAGTTGATTAATATCGACCAAAGTCCAATTGGCCGGA
CACCGCGGAGTAATCCAGCCACTTATACTGGAGTCTTCGATAATGTCCGTGATTTATTCGCCCAAACCAATGAAGCGAAG
TTACGAGGCTACAAGAAGGGCCGTTTTAGTTTTAATGTGAAGGGCGGTCGCTGTGAAGCCTGCAAGGGTGACGGGATTAT
CAAGATTGAAATGAATTTCTTACCGGATGTCTATGTCCCTTGTGAAATTTGTCATGGTAGCCGTTATAATTCAGAAACTT
TAGAAGTGGTTTACAAAGGCAAGAATATTGCTGAAATTTTGGATATGACCGTTTCTGAAGCAACTGAATTCTTCGAAAAT
ATTCCTAAGATTGCCCGTAAACTACAAACAATCGTCGATGTTGGTTTAGGTTATGTAACATTGGGCCAATCGGCAACAAC
CTTATCTGGTGGAGAAGCCCAACGGATGAAATTGGCTTCTGAATTACAAAAGCAATCAACAGGTAAGAACTTGTATATCT
TGGACGAACCAACAACTGGTTTGCATACGGATGATATCAAACGGTTGTTAGGCGTACTAGAACGGTTGGTTGATGAAGGC
AACACGGTTTTAGTCATCGAACATAATCTAGATGTGATTAAAACAGCTGATTATATCATTGATTTAGGACCAGAAGGCGG
TGACAAAGGTGGCACCATCGTTGCGACTGGCACACCTGAAACGTTAGTGAACGTTGCAGAAAGCTATACGGGGCGCTACT
TGAAACCAATTTTAGAACGGGATACCGCCCGCACATTAGCGGCACAAGAATAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

• ABC transporter (ABC_tran) (622-858)

• UvrA interaction domain (UvrA_inter) (132-236)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	75.558	99.053	0.748
uvrA	Streptococcus pneumoniae TIGR4	75.558	99.053	0.748
uvrA	Streptococcus pneumoniae D39	75.558	99.053	0.748