Detailed information NTG0779704

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: QYM42_RS06110
• Genome accession: NZ_CP129526
• Coordinates: 1228545..1229615 (-)
• Length: 356 a.a.
• NCBI ID: WP_251900429.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain ZZ-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1223545..1234615

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYM42_RS06095 (QYM42_06095)	dprA	1223843..1224691 (+)	849	WP_251900428.1	DNA-processing protein DprA	Machinery gene
QYM42_RS06100 (QYM42_06100)	topA	1224953..1227085 (+)	2133	WP_003131148.1	type I DNA topoisomerase	-
QYM42_RS06105 (QYM42_06105)	trmFO	1227157..1228500 (+)	1344	WP_003131150.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
QYM42_RS06110 (QYM42_06110)	xerS	1228545..1229615 (-)	1071	WP_251900429.1	tyrosine recombinase XerS	Machinery gene
QYM42_RS06115 (QYM42_06115)	-	1230100..1230387 (-)	288	WP_033899768.1	hypothetical protein	-
QYM42_RS06120 (QYM42_06120)	xerS	1230471..1231526 (-)	1056	WP_251899613.1	tyrosine recombinase XerS	Machinery gene
QYM42_RS06125 (QYM42_06125)	-	1232256..1233173 (-)	918	WP_251899614.1	N(5)-(carboxyethyl)ornithine synthase	-
QYM42_RS06130 (QYM42_06130)	-	1233213..1233416 (-)	204	WP_317614872.1	CorA family divalent cation transporter	-
QYM42_RS06135 (QYM42_06135)	-	1233551..1234102 (-)	552	WP_195228714.1	Asp23/Gls24 family envelope stress response protein	-
QYM42_RS06140 (QYM42_06140)	-	1234123..1234311 (-)	189	WP_011835142.1	DUF2273 domain-containing protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41399.18 Da
• Isoelectric Point: 9.6568

>NTDB_id=779704 QYM42_RS06110 WP_251900429.1 1228545..1229615(-) (xerS) [Lactococcus lactis strain ZZ-2]
MKREQLIQNIEKLKHIMPSYVLEYYQSKLTIPYSLNTLYEYLKEYERFFSWLVDSGVADVDKITDVSLSVLENLTKRDLE
SFILYLRERPRLNTRSTRYGVSQTTINRTLSALSSLYKYLTEEVENEDGEPYFYRNVMKKVQTKKKSETLASRAENIKGK
LFLGDETQGFLDYIDNEYEKTLSNRARSSFFKNKERDLAIIALILASGIRLSEAVNVDLRDLNLITMVVEVTRKGGKRDA
VPYAPFAKSYFERYLEVRSQRYKTTAKDTAFFVTLYRDVPSRIDPSSVEKLVAKYSQSFKVRVTPHKLRHTLATRLYAQT
NSQVLVSNQLGHASTQVTDLYTHIINEEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=779704 QYM42_RS06110 WP_251900429.1 1228545..1229615(-) (xerS) [Lactococcus lactis strain ZZ-2]
ATGAAACGTGAACAATTAATACAAAATATTGAAAAACTAAAACATATCATGCCTTCTTATGTTTTAGAATATTATCAATC
TAAACTTACTATTCCTTATAGTTTGAATACACTTTATGAATATCTTAAAGAATATGAACGTTTCTTTAGTTGGTTGGTCG
ATTCTGGAGTTGCTGATGTTGATAAGATAACTGATGTTTCCCTCTCTGTTTTAGAAAACTTGACTAAACGAGATTTGGAG
TCATTTATCCTCTATCTTAGGGAGAGACCCCGTTTAAATACGCGCTCTACTCGTTATGGGGTAAGTCAAACAACAATTAA
TCGTACTCTATCTGCTCTTTCTAGTCTTTATAAATACCTTACTGAAGAGGTTGAAAATGAAGATGGTGAGCCTTACTTCT
ATCGTAATGTTATGAAGAAGGTACAGACTAAGAAAAAATCCGAAACTTTAGCTTCTCGTGCTGAGAATATTAAAGGGAAG
CTTTTTTTGGGAGATGAAACTCAAGGTTTTCTTGACTATATTGATAATGAATATGAAAAAACATTATCAAATAGAGCTCG
TTCTAGTTTTTTCAAAAATAAAGAACGTGATTTAGCAATTATTGCACTTATTTTAGCCTCTGGTATTCGTCTTTCTGAGG
CAGTTAATGTAGATTTAAGAGATTTAAATCTTATTACTATGGTTGTTGAGGTGACTCGTAAAGGAGGAAAAAGGGATGCT
GTTCCTTATGCTCCTTTTGCCAAAAGTTATTTTGAAAGATACTTGGAGGTACGAAGTCAACGTTATAAGACTACAGCGAA
AGATACGGCATTTTTTGTGACACTTTATAGAGATGTTCCTAGCCGAATAGATCCTTCTAGTGTTGAAAAATTAGTTGCTA
AATATTCTCAATCTTTTAAAGTGCGAGTGACCCCTCACAAGCTTAGACATACACTTGCGACTCGACTTTATGCTCAAACA
AATTCTCAGGTATTGGTGAGCAATCAGTTAGGGCATGCTTCAACTCAAGTTACAGACCTCTATACTCATATTATCAATGA
AGAACAAAAAAATGCTCTAGATAATCTATAA

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (182-344)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	76.685	100	0.767