Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   POF63_RS09110 Genome accession   NZ_CP116708
Coordinates   1785337..1786596 (-) Length   419 a.a.
NCBI ID   WP_000900651.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain CNCTC 10/84 sCas9     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1780337..1791596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  POF63_RS09100 (POF63_09100) - 1782683..1783267 (-) 585 WP_000842270.1 glycoside hydrolase family 73 protein -
  POF63_RS09105 (POF63_09105) - 1783392..1785245 (-) 1854 WP_000814041.1 proline--tRNA ligase -
  POF63_RS09110 (POF63_09110) eeP 1785337..1786596 (-) 1260 WP_000900651.1 RIP metalloprotease RseP Regulator
  POF63_RS09115 (POF63_09115) - 1786627..1787421 (-) 795 WP_000664686.1 phosphatidate cytidylyltransferase -
  POF63_RS09120 (POF63_09120) - 1787436..1788188 (-) 753 WP_000469560.1 isoprenyl transferase -
  POF63_RS09125 (POF63_09125) yajC 1788355..1788696 (-) 342 WP_000056607.1 preprotein translocase subunit YajC -
  POF63_RS09130 (POF63_09130) - 1788773..1789117 (-) 345 WP_000286792.1 thioredoxin domain-containing protein -
  POF63_RS09135 (POF63_09135) - 1789308..1790471 (-) 1164 WP_001293704.1 malic enzyme-like NAD(P)-binding protein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 46030.99 Da        Isoelectric Point: 9.9616

>NTDB_id=779336 POF63_RS09110 WP_000900651.1 1785337..1786596(-) (eeP) [Streptococcus agalactiae strain CNCTC 10/84 sCas9]
MLGILTFIIIFGVIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFSHIDKEGTTYTIRILPLGGYVRMAGWGDDKTEIKT
GTPASLTLNKEGIVTRINLSGKQLDNTSLPINVTAYDLEDKLTITGLVLSETKTYSVDHDATIIEEDGTEIRIAPLDVQY
QNASVWGRLITNFAGPMNNFILGLVVFIALAFIQGGVQDLSTNQVRVSENGPAASAGLKNNDRILQIGSHKVSNWEQLTA
AVEKSTSHLEKNQKLALKIKSKEVVKTINVKPQKVDKSYIIGIMPALKTSFKDKLLGGFKLAWESFFRILNELKKLIAHF
SINKLGGPVALYQASSQAAKNGFVTVLNLMGLISINLGIMNLIPIPALDGGKIVMNILEAIRRKPLKQETETYITLAGVA
VMLVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=779336 POF63_RS09110 WP_000900651.1 1785337..1786596(-) (eeP) [Streptococcus agalactiae strain CNCTC 10/84 sCas9]
ATGCTAGGAATTTTAACCTTTATTATTATTTTTGGTGTCATTGTAGTTGTTCACGAATTTGGGCATTTCTATTTTGCAAA
GAAATCAGGAATTCTTGTTCGTGAATTTGCTATTGGTATGGGTCCAAAAATCTTTTCTCACATTGATAAAGAAGGAACAA
CCTATACTATTCGTATATTACCGCTAGGTGGTTATGTCCGTATGGCTGGTTGGGGTGATGATAAGACTGAAATTAAGACA
GGGACGCCGGCTAGCCTTACTTTAAATAAAGAAGGCATTGTAACTCGTATTAATTTATCAGGAAAACAATTAGACAATAC
TTCTTTACCAATCAATGTAACAGCTTATGATTTAGAAGATAAACTAACTATCACAGGATTGGTCTTAAGTGAGACAAAAA
CCTACAGTGTTGATCACGATGCTACTATCATTGAGGAGGATGGTACTGAAATTCGTATTGCTCCCTTAGATGTGCAGTAT
CAGAATGCTTCTGTATGGGGGCGTTTAATTACCAATTTTGCAGGTCCGATGAATAATTTTATTTTAGGTCTTGTAGTCTT
TATTGCACTTGCTTTTATTCAAGGAGGTGTTCAAGATTTATCAACCAATCAGGTCCGTGTATCAGAAAATGGTCCTGCTG
CTAGTGCAGGTTTAAAAAATAATGACCGTATTTTACAAATAGGGTCGCACAAAGTTTCTAACTGGGAACAGTTGACAGCA
GCAGTAGAAAAGTCAACTAGTCATTTAGAAAAAAACCAAAAACTTGCCCTTAAGATTAAGAGCAAAGAGGTGGTGAAAAC
GATCAACGTTAAGCCACAGAAAGTTGATAAATCCTACATCATCGGCATTATGCCAGCTCTAAAGACAAGCTTTAAAGACA
AGCTTTTAGGTGGATTTAAACTAGCATGGGAAAGTTTCTTTAGAATTTTAAATGAATTAAAGAAACTTATTGCTCATTTT
AGTATTAATAAATTGGGAGGTCCGGTAGCTCTCTATCAGGCTAGTAGCCAAGCTGCTAAAAATGGTTTCGTCACAGTTCT
CAACTTAATGGGATTAATCTCTATCAACTTAGGTATTATGAATCTCATCCCTATACCAGCCCTTGACGGGGGTAAGATAG
TGATGAATATTTTAGAAGCTATTCGTCGCAAACCACTTAAACAAGAAACAGAAACTTATATTACGCTCGCTGGGGTAGCA
GTTATGTTAGTATTAATGATTGCTGTAACCTGGAACGATATCATGCGAGCTTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)

(205-271)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

69.524

100

0.697

  eeP Streptococcus thermophilus LMD-9

69.286

100

0.695