Detailed information NTG0077907

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MWM17_RS22290
• Genome accession: NZ_AP025657
• Coordinates: 4663524..4664549 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain TUM13867
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4658524..4669549

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWM17_RS22270 (TUM13867_42650)	metJ	4659709..4660026 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MWM17_RS22275 (TUM13867_42660)	yiiX	4660086..4660694 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
MWM17_RS22280 (TUM13867_42670)	rpmE	4660755..4660967 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MWM17_RS22285 (TUM13867_42680)	priA	4661170..4663368 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
MWM17_RS22290 (TUM13867_42690)	cytR	4663524..4664549 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MWM17_RS22295 (TUM13867_42700)	ftsN	4664641..4665600 (+)	960	WP_000068844.1	cell division protein FtsN	-
MWM17_RS22300 (TUM13867_42710)	hslV	4665693..4666223 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MWM17_RS22305 (TUM13867_42720)	hslU	4666233..4667564 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MWM17_RS22310 (TUM13867_42730)	menA	4667631..4668557 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MWM17_RS22315 (TUM13867_42740)	rraA	4668650..4669135 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=77907 MWM17_RS22290 WP_000644904.1 4663524..4664549(+) (cytR) [Escherichia coli strain TUM13867]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=77907 MWM17_RS22290 WP_000644904.1 4663524..4664549(+) (cytR) [Escherichia coli strain TUM13867]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628