Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PMC74_RS24355 Genome accession   NZ_CP116669
Coordinates   5425899..5426300 (-) Length   133 a.a.
NCBI ID   WP_033701912.1    Uniprot ID   A0A6L6TFN9
Organism   Pseudomonas capeferrum strain TDA1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5420899..5431300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PMC74_RS24340 (PMC74_24340) - 5422864..5424888 (-) 2025 WP_156310511.1 methyl-accepting chemotaxis protein -
  PMC74_RS24345 (PMC74_24345) - 5424936..5425490 (-) 555 WP_033701910.1 chemotaxis protein CheW -
  PMC74_RS24350 (PMC74_24350) pilH 5425487..5425852 (-) 366 WP_033701911.1 twitching motility response regulator PilH -
  PMC74_RS24355 (PMC74_24355) pilG 5425899..5426300 (-) 402 WP_033701912.1 response regulator Regulator
  PMC74_RS24360 (PMC74_24360) gshB 5426542..5427495 (+) 954 WP_033701913.1 glutathione synthase -
  PMC74_RS24365 (PMC74_24365) - 5427587..5428492 (+) 906 WP_033701914.1 energy transducer TonB -
  PMC74_RS24370 (PMC74_24370) - 5428582..5429151 (+) 570 WP_033701915.1 YqgE/AlgH family protein -
  PMC74_RS24375 (PMC74_24375) ruvX 5429151..5429576 (+) 426 WP_033701916.1 Holliday junction resolvase RuvX -
  PMC74_RS24380 (PMC74_24380) pyrR 5429623..5430141 (+) 519 WP_033701917.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PMC74_RS24385 (PMC74_24385) - 5430154..5431158 (+) 1005 WP_033701918.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14770.02 Da        Isoelectric Point: 6.3259

>NTDB_id=778978 PMC74_RS24355 WP_033701912.1 5425899..5426300(-) (pilG) [Pseudomonas capeferrum strain TDA1]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALSKIVDHQPQIIFVDVLMPRLDGYQTCAVIKHNSAFKDIP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAEHQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=778978 PMC74_RS24355 WP_033701912.1 5425899..5426300(-) (pilG) [Pseudomonas capeferrum strain TDA1]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCACGCACGATCCGCCGTACCGCGCAGATGTTGCTCGGCGAAGC
GGGTTGCGAGGTGATTACCGCCAGCGATGGCTTCGATGCCCTGTCCAAGATCGTCGACCACCAGCCACAGATCATCTTCG
TCGATGTGCTGATGCCGCGCCTGGACGGTTACCAGACCTGCGCCGTGATCAAGCACAACAGTGCCTTCAAGGACATACCG
GTGATTCTCCTGTCGTCGCGCGACGGCCTGTTCGACAAGGCCCGCGGGCGGGTGGTGGGGTCCGACCAGTTCCTCACCAA
GCCGTTCAGCAAGGAAGAACTGCTCGATGCGATCAGGGCCCATGTGCCCGGTTTTGCCGAACACCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6L6TFN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.667

90.226

0.647