Detailed information NTG0778905

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QYF46_RS01110
• Genome accession: NZ_CP129383
• Coordinates: 238590..239573 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain STEC434
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 233590..244573

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYF46_RS01095 (QYF46_01095)	dppA	234733..236340 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
QYF46_RS01100 (QYF46_01100)	dppB	236648..237667 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
QYF46_RS01105 (QYF46_01105)	dppC	237677..238579 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
QYF46_RS01110 (QYF46_01110)	amiE	238590..239573 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
QYF46_RS01115 (QYF46_01115)	dppF	239570..240574 (+)	1005	WP_000107026.1	dipeptide ABC transporter ATP-binding subunit DppF	-
QYF46_RS01120 (QYF46_01120)	yhjV	240604..241875 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
QYF46_RS01125 (QYF46_01125)	-	242351..242458 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QYF46_RS01130 (QYF46_01130)	-	242834..242941 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QYF46_RS01135 (QYF46_01135)	-	243317..243424 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=778905 QYF46_RS01110 WP_001196486.1 238590..239573(+) (amiE) [Escherichia coli strain STEC434]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=778905 QYF46_RS01110 WP_001196486.1 238590..239573(+) (amiE) [Escherichia coli strain STEC434]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404