Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QYE86_RS10125 Genome accession   NZ_CP129360
Coordinates   2021670..2022488 (-) Length   272 a.a.
NCBI ID   WP_044290495.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CKMM-401M     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2016670..2027488
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYE86_RS10105 - 2017763..2018740 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  QYE86_RS10110 - 2019001..2019837 (-) 837 WP_000886465.1 membrane protein -
  QYE86_RS10115 - 2019846..2021363 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  QYE86_RS10120 - 2021378..2021692 (-) 315 WP_000435806.1 YfhH family protein -
  QYE86_RS10125 recX 2021670..2022488 (-) 819 WP_044290495.1 recombination regulator RecX Regulator
  QYE86_RS10130 sgtB 2022749..2023558 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  QYE86_RS10135 - 2023898..2024413 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  QYE86_RS10140 - 2024543..2024704 (-) 162 WP_044290500.1 SE1561 family protein -
  QYE86_RS10145 yfkAB 2024928..2026079 (+) 1152 WP_044290502.1 radical SAM/CxCxxxxC motif protein YfkAB -
  QYE86_RS10150 - 2026339..2026869 (-) 531 WP_044290503.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32273.12 Da        Isoelectric Point: 5.9231

>NTDB_id=778882 QYE86_RS10125 WP_044290495.1 2021670..2022488(-) (recX) [Staphylococcus aureus strain CKMM-401M]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTEKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=778882 QYE86_RS10125 WP_044290495.1 2021670..2022488(-) (recX) [Staphylococcus aureus strain CKMM-401M]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGAAAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993