Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QYE86_RS09790 Genome accession   NZ_CP129360
Coordinates   1974931..1975671 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CKMM-401M     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1969931..1980671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYE86_RS09765 hemH 1970807..1971730 (-) 924 WP_000162879.1 ferrochelatase -
  QYE86_RS09770 hemE 1971788..1972825 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  QYE86_RS09775 - 1972815..1972925 (-) 111 WP_001790154.1 hypothetical protein -
  QYE86_RS09780 traP 1973088..1973591 (+) 504 WP_000737978.1 signal transduction protein TRAP -
  QYE86_RS09785 - 1973715..1974938 (-) 1224 WP_044290405.1 ABC transporter permease -
  QYE86_RS09790 pptA 1974931..1975671 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  QYE86_RS09795 - 1975805..1976227 (+) 423 WP_000004981.1 HIT family protein -
  QYE86_RS09800 - 1976369..1976734 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  QYE86_RS09805 - 1977467..1978024 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  QYE86_RS09810 - 1978229..1979191 (+) 963 WP_044290414.1 foldase protein PrsA -
  QYE86_RS09815 yhaM 1979312..1980253 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=778879 QYE86_RS09790 WP_000216874.1 1974931..1975671(-) (pptA) [Staphylococcus aureus strain CKMM-401M]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=778879 QYE86_RS09790 WP_000216874.1 1974931..1975671(-) (pptA) [Staphylococcus aureus strain CKMM-401M]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGTGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACATATAGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAAACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATTGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545