Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QYE86_RS03985 Genome accession   NZ_CP129360
Coordinates   774796..775470 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain CKMM-401M     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 769796..780470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYE86_RS03960 - 770011..771078 (+) 1068 WP_000980137.1 membrane protein -
  QYE86_RS03965 - 771229..772272 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  QYE86_RS03970 - 772601..773029 (+) 429 WP_000198504.1 hypothetical protein -
  QYE86_RS03975 - 773238..773744 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  QYE86_RS03980 graX 773857..774780 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  QYE86_RS03985 braR 774796..775470 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  QYE86_RS03990 graS 775463..776503 (+) 1041 WP_001061264.1 histidine kinase GraS/ApsS -
  QYE86_RS03995 vraF 776647..777408 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  QYE86_RS04000 vraG 777398..779287 (+) 1890 WP_044288684.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=778823 QYE86_RS03985 WP_001166500.1 774796..775470(+) (braR) [Staphylococcus aureus strain CKMM-401M]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=778823 QYE86_RS03985 WP_001166500.1 774796..775470(+) (braR) [Staphylococcus aureus strain CKMM-401M]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTTGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397