Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   PHA78_RS10150 Genome accession   NZ_CP116604
Coordinates   2088734..2089468 (-) Length   244 a.a.
NCBI ID   WP_002942356.1    Uniprot ID   G7SIC8
Organism   Streptococcus sp. HN38     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2083734..2094468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PHA78_RS10120 - 2083949..2084245 (-) 297 WP_002942375.1 YlxR family protein -
  PHA78_RS10125 nusA 2084262..2085416 (-) 1155 WP_029175752.1 transcription termination factor NusA -
  PHA78_RS10130 rimP 2085490..2085960 (-) 471 WP_002942369.1 ribosome maturation factor RimP -
  PHA78_RS10135 trmB 2086218..2086856 (-) 639 WP_099870361.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PHA78_RS10140 - 2086853..2087647 (-) 795 WP_002942360.1 phosphotransferase family protein -
  PHA78_RS10145 - 2087697..2088737 (-) 1041 WP_272158116.1 ABC transporter permease -
  PHA78_RS10150 pptA 2088734..2089468 (-) 735 WP_002942356.1 ABC transporter ATP-binding protein Regulator
  PHA78_RS10155 - 2089531..2089944 (+) 414 WP_024376433.1 HIT family protein -
  PHA78_RS10160 - 2089946..2090275 (+) 330 WP_002942350.1 hypothetical protein -
  PHA78_RS10165 - 2090749..2091942 (-) 1194 WP_099780205.1 LCP family protein -
  PHA78_RS10170 - 2091939..2092466 (-) 528 WP_099780206.1 GNAT family N-acetyltransferase -
  PHA78_RS10175 tsaE 2092459..2092899 (-) 441 WP_024376437.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26832.10 Da        Isoelectric Point: 4.3606

>NTDB_id=778784 PHA78_RS10150 WP_002942356.1 2088734..2089468(-) (pptA) [Streptococcus sp. HN38]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLEEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSAFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=778784 PHA78_RS10150 WP_002942356.1 2088734..2089468(-) (pptA) [Streptococcus sp. HN38]
ATGTTAGAAGTAAAAAATGTAACTGGGGGATATGTCAATATCCCAGTTTTGAAAGATGTATCTTTTACCGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACGACTATTAAGGAAATTATCGGTCTTTTGACCCCCT
ATCAGGGACAGATTGCAATTGACGGCCTAACTTTGCTACAAGGGGCTGAAAATTATCGGAAGAAGATTGGGTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTGTCGAGCACTTGTTAAAACTGTTTCGCTTGGATGAGAAATTGGACTGGTTTCCTGTCAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTATTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCTGTGGCTATCTCTGATTTAATCGCTCTTTTGGAGGAAGAAAAATCTAAGGGCACTTCAATCCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTCCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCGCATTTGGTATGGATGGTGCAAGTCTGAACGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G7SIC8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

97.951

0.738
  pptA Streptococcus thermophilus LMD-9

73.64

97.951

0.721