Detailed information NTG0077852

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ICHIJ1_RS11375
• Genome accession: NZ_AP022347
• Coordinates: 2288575..2289540 (+)
• Length: 321 a.a.
• NCBI ID: WP_418744638.1
• Uniprot ID: -
• Organism: Fluviibacter phosphoraccumulans strain ICHIJ1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2283575..2294540

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ICHIJ1_RS11350 (ICHIJ1_22400)	-	2284404..2284652 (-)	249	WP_162050689.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ICHIJ1_RS11355 (ICHIJ1_22410)	coaD	2284736..2285233 (-)	498	WP_162051006.1	pantetheine-phosphate adenylyltransferase	-
ICHIJ1_RS11360 (ICHIJ1_22420)	rsmD	2285238..2285825 (-)	588	WP_162050690.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ICHIJ1_RS11365 (ICHIJ1_22430)	-	2285828..2287129 (-)	1302	WP_162050691.1	M16 family metallopeptidase	-
ICHIJ1_RS11370 (ICHIJ1_22440)	-	2287138..2288544 (-)	1407	WP_162050692.1	M16 family metallopeptidase	-
ICHIJ1_RS11375 (ICHIJ1_22450)	pilA	2288575..2289540 (+)	966	WP_418744638.1	signal recognition particle-docking protein FtsY	Machinery gene
ICHIJ1_RS11380 (ICHIJ1_22460)	-	2289552..2290667 (+)	1116	WP_162050694.1	calcium:proton antiporter	-
ICHIJ1_RS11385 (ICHIJ1_22470)	rpoH	2290771..2291649 (+)	879	WP_418744637.1	RNA polymerase sigma factor RpoH	-
ICHIJ1_RS11390 (ICHIJ1_22480)	-	2291789..2292517 (+)	729	WP_162050696.1	YebC/PmpR family DNA-binding transcriptional regulator	-
ICHIJ1_RS11395 (ICHIJ1_22490)	ruvC	2292566..2293129 (+)	564	WP_242451614.1	crossover junction endodeoxyribonuclease RuvC	-
ICHIJ1_RS11400 (ICHIJ1_22500)	ruvA	2293126..2293722 (+)	597	WP_162050698.1	Holliday junction branch migration protein RuvA	-

Sequence

Protein

• Length: 321 a.a.
• Molecular weight: 34092.19 Da
• Isoelectric Point: 6.6123

>NTDB_id=77852 ICHIJ1_RS11375 WP_418744638.1 2288575..2289540(+) (pilA) [Fluviibacter phosphoraccumulans strain ICHIJ1]
MTKDTPATMSDATDNQPRRSWRERLFAGLTKTRQQIGGSVRSLFARGQVDDELLEELEALLLSADVGVEATIILIEDLRQ
RARKHKLQTPEAIQSAMVDCLADLLQPLEAPLQISPPADSPFVIMVAGINGAGKTTTLGKLAHHFQAAGHSVLLAAGDTF
RAAAREQLQAWGARNNVTVIAQEGGDPSAVIFDAVHAAKARGIDVVLADTAGRLPTQMHLMDEIAKIRRVITKAEATAPH
EVLLVLDGTIGQNAIGQVKAFDKAIGVTGLVITKLDGSAKGGVLAAIAKQCPKPVRYIGVGEQIEDLQPFSARAFAEALV
G

Nucleotide

• Length: 966 bp

>NTDB_id=77852 ICHIJ1_RS11375 WP_418744638.1 2288575..2289540(+) (pilA) [Fluviibacter phosphoraccumulans strain ICHIJ1]
ATTACCAAGGATACCCCTGCCACCATGTCTGACGCTACTGATAACCAGCCACGCCGCTCCTGGCGCGAACGTCTTTTTGC
CGGACTCACCAAGACCCGGCAGCAGATAGGCGGCTCGGTCCGCAGCCTGTTTGCCCGGGGTCAGGTGGATGACGAGCTCC
TGGAAGAGCTCGAAGCCCTGCTGCTTTCAGCCGATGTGGGCGTTGAAGCCACGATTATCCTCATTGAAGATCTTCGCCAG
CGCGCCCGCAAACACAAGCTGCAAACACCCGAGGCCATTCAATCGGCGATGGTCGATTGTCTGGCTGATTTACTCCAACC
GCTGGAAGCCCCATTACAGATCAGCCCACCCGCCGACTCGCCCTTTGTGATTATGGTGGCCGGCATCAATGGGGCGGGCA
AAACGACCACGCTGGGCAAGCTGGCGCATCATTTCCAGGCAGCTGGCCATTCCGTGCTGCTTGCCGCAGGCGATACCTTC
CGGGCCGCGGCACGGGAGCAACTGCAGGCCTGGGGTGCGCGCAATAATGTCACCGTGATTGCCCAGGAAGGCGGCGACCC
GTCGGCCGTTATTTTTGATGCGGTGCATGCCGCTAAAGCCCGGGGGATTGATGTGGTGCTGGCCGATACTGCCGGCCGCT
TACCAACCCAGATGCATCTGATGGACGAAATCGCCAAGATCCGCCGGGTCATTACCAAAGCCGAAGCCACTGCACCGCAT
GAAGTCTTGCTGGTGCTTGACGGCACGATTGGGCAAAACGCCATCGGTCAGGTCAAAGCTTTCGACAAGGCCATCGGCGT
TACTGGCCTGGTCATCACCAAACTGGATGGTTCCGCCAAAGGCGGCGTTCTTGCCGCGATTGCCAAGCAGTGTCCCAAAC
CCGTGCGTTACATCGGGGTAGGCGAACAAATCGAAGACTTGCAGCCTTTTAGCGCCCGCGCTTTCGCCGAAGCTTTAGTC
GGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (35-100)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	60.518	96.262	0.583