Detailed information NTG0077831

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ICHIAU1_RS04070
• Genome accession: NZ_AP022345
• Coordinates: 798415..799380 (-)
• Length: 321 a.a.
• NCBI ID: WP_418744638.1
• Uniprot ID: -
• Organism: Fluviibacter phosphoraccumulans strain ICHIAU1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 793415..804380

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ICHIAU1_RS04045 (ICHIAU1_07970)	ruvA	794233..794829 (-)	597	WP_162050698.1	Holliday junction branch migration protein RuvA	-
ICHIAU1_RS04050 (ICHIAU1_07980)	ruvC	794826..795434 (-)	609	WP_162050697.1	crossover junction endodeoxyribonuclease RuvC	-
ICHIAU1_RS04055 (ICHIAU1_07990)	-	795438..796166 (-)	729	WP_162050696.1	YebC/PmpR family DNA-binding transcriptional regulator	-
ICHIAU1_RS04060 (ICHIAU1_08000)	rpoH	796306..797184 (-)	879	WP_418744637.1	RNA polymerase sigma factor RpoH	-
ICHIAU1_RS04065 (ICHIAU1_08010)	-	797288..798403 (-)	1116	WP_162050694.1	calcium:proton antiporter	-
ICHIAU1_RS04070 (ICHIAU1_08020)	pilA	798415..799380 (-)	966	WP_418744638.1	signal recognition particle-docking protein FtsY	Machinery gene
ICHIAU1_RS04075 (ICHIAU1_08030)	-	799411..800817 (+)	1407	WP_162050692.1	M16 family metallopeptidase	-
ICHIAU1_RS04080 (ICHIAU1_08040)	-	800826..802127 (+)	1302	WP_162050691.1	M16 family metallopeptidase	-
ICHIAU1_RS04085 (ICHIAU1_08050)	rsmD	802130..802717 (+)	588	WP_162050690.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ICHIAU1_RS04090 (ICHIAU1_08060)	coaD	802722..803219 (+)	498	WP_162051006.1	pantetheine-phosphate adenylyltransferase	-
ICHIAU1_RS04095 (ICHIAU1_08070)	-	803303..803551 (+)	249	WP_162050689.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 321 a.a.
• Molecular weight: 34092.19 Da
• Isoelectric Point: 6.6123

>NTDB_id=77831 ICHIAU1_RS04070 WP_418744638.1 798415..799380(-) (pilA) [Fluviibacter phosphoraccumulans strain ICHIAU1]
MTKDTPATMSDATDNQPRRSWRERLFAGLTKTRQQIGGSVRSLFARGQVDDELLEELEALLLSADVGVEATIILIEDLRQ
RARKHKLQTPEAIQSAMVDCLADLLQPLEAPLQISPPADSPFVIMVAGINGAGKTTTLGKLAHHFQAAGHSVLLAAGDTF
RAAAREQLQAWGARNNVTVIAQEGGDPSAVIFDAVHAAKARGIDVVLADTAGRLPTQMHLMDEIAKIRRVITKAEATAPH
EVLLVLDGTIGQNAIGQVKAFDKAIGVTGLVITKLDGSAKGGVLAAIAKQCPKPVRYIGVGEQIEDLQPFSARAFAEALV
G

Nucleotide

• Length: 966 bp

>NTDB_id=77831 ICHIAU1_RS04070 WP_418744638.1 798415..799380(-) (pilA) [Fluviibacter phosphoraccumulans strain ICHIAU1]
ATTACCAAGGATACCCCTGCCACCATGTCTGACGCTACTGATAACCAGCCACGCCGCTCCTGGCGCGAACGTCTTTTTGC
CGGACTCACCAAGACCCGGCAGCAGATAGGCGGCTCGGTCCGCAGCCTGTTTGCCCGGGGTCAGGTGGATGACGAGCTCC
TGGAAGAGCTCGAAGCCCTGCTGCTTTCAGCCGATGTGGGCGTTGAAGCCACGATTATCCTCATTGAAGATCTTCGCCAG
CGCGCCCGCAAACACAAGCTGCAAACACCCGAGGCCATTCAATCGGCGATGGTCGATTGTCTGGCTGATTTACTCCAACC
GCTGGAAGCCCCATTACAGATCAGCCCACCCGCCGACTCGCCCTTTGTGATTATGGTGGCCGGCATCAATGGGGCGGGCA
AAACGACCACGCTGGGCAAGCTGGCGCATCATTTCCAGGCAGCTGGCCATTCCGTGCTGCTTGCCGCAGGCGATACCTTC
CGGGCCGCGGCACGGGAGCAACTGCAGGCCTGGGGTGCGCGCAATAATGTCACCGTGATTGCCCAGGAAGGCGGCGACCC
GTCGGCCGTTATTTTTGATGCGGTGCATGCCGCTAAAGCCCGGGGGATTGATGTGGTGCTGGCCGATACTGCCGGCCGCT
TACCAACCCAGATGCATCTGATGGACGAAATCGCCAAGATCCGCCGGGTCATTACCAAAGCCGAAGCCACTGCACCGCAT
GAAGTCTTGCTGGTGCTTGACGGCACGATTGGGCAAAACGCCATCGGTCAGGTCAAAGCTTTCGACAAGGCCATCGGCGT
TACTGGCCTGGTCATCACCAAACTGGATGGTTCCGCCAAAGGCGGCGTTCTTGCCGCGATTGCCAAGCAGTGTCCCAAAC
CCGTGCGTTACATCGGGGTAGGCGAACAAATCGAAGACTTGCAGCCTTTTAGCGCCCGCGCTTTCGCCGAAGCTTTAGTC
GGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (35-100)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	60.518	96.262	0.583