Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QYC34_RS06850 Genome accession   NZ_CP129338
Coordinates   1304571..1305314 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain SRCM126725     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1299571..1310314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYC34_RS06815 (QYC34_06815) yhaI 1299900..1300241 (+) 342 WP_033881416.1 YhaI family protein -
  QYC34_RS06820 (QYC34_06820) scoC 1300238..1300849 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  QYC34_RS06825 (QYC34_06825) yhaH 1301027..1301383 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  QYC34_RS06830 (QYC34_06830) - 1301513..1301704 (+) 192 WP_003233238.1 hypothetical protein -
  QYC34_RS06835 (QYC34_06835) trpP 1301777..1302295 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  QYC34_RS06840 (QYC34_06840) serC 1302420..1303499 (-) 1080 WP_014479338.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  QYC34_RS06845 (QYC34_06845) hinT 1303646..1304083 (-) 438 WP_003233231.1 HIT family protein -
  QYC34_RS06850 (QYC34_06850) pptA 1304571..1305314 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  QYC34_RS06855 (QYC34_06855) ecsB 1305307..1306533 (+) 1227 WP_046160231.1 ABC transporter permease EcsB -
  QYC34_RS06860 (QYC34_06860) ecsC 1306553..1307263 (+) 711 WP_046160232.1 EcsC family protein -
  QYC34_RS06865 (QYC34_06865) sndC 1307281..1308471 (-) 1191 WP_032725323.1 N-acetyl amino acid acetylase SndC -
  QYC34_RS06870 (QYC34_06870) - 1308543..1309934 (-) 1392 WP_082090366.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=778260 QYC34_RS06850 WP_003233230.1 1304571..1305314(+) (pptA) [Bacillus subtilis strain SRCM126725]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=778260 QYC34_RS06850 WP_003233230.1 1304571..1305314(+) (pptA) [Bacillus subtilis strain SRCM126725]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGATTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547