Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   SNM_RS10065 Genome accession   NZ_AP025613
Coordinates   1845524..1846291 (-) Length   255 a.a.
NCBI ID   WP_244346682.1    Uniprot ID   -
Organism   Thermus thermophilus strain SNM6-6     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1840524..1851291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SNM_RS10035 (TthSNM66_19730) - 1840812..1841264 (+) 453 WP_244346678.1 arsenate reductase ArsC -
  SNM_RS10040 (TthSNM66_19740) ubiE 1841261..1841923 (-) 663 WP_244345230.1 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE -
  SNM_RS10045 (TthSNM66_19750) - 1842015..1843829 (+) 1815 WP_244346679.1 ABC transporter permease -
  SNM_RS10050 (TthSNM66_19760) - 1843826..1844749 (+) 924 WP_244346681.1 ABC transporter permease -
  SNM_RS10055 (TthSNM66_19770) - 1844737..1844994 (-) 258 WP_011173881.1 hypothetical protein -
  SNM_RS10060 (TthSNM66_19780) - 1844991..1845527 (-) 537 WP_011173882.1 flavin reductase family protein -
  SNM_RS10065 (TthSNM66_19790) yaaT 1845524..1846291 (-) 768 WP_244346682.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  SNM_RS10070 (TthSNM66_19800) - 1846288..1847094 (-) 807 WP_244340938.1 DNA polymerase III subunit delta' -
  SNM_RS10075 (TthSNM66_19810) - 1847061..1847783 (-) 723 WP_008633820.1 metallophosphoesterase family protein -
  SNM_RS10080 (TthSNM66_19820) - 1847798..1848427 (+) 630 WP_011173885.1 hypothetical protein -
  SNM_RS10085 (TthSNM66_19830) - 1848438..1848638 (+) 201 WP_011173886.1 hypothetical protein -
  SNM_RS10090 (TthSNM66_19840) - 1848720..1850039 (+) 1320 WP_244346683.1 S-layer homology domain-containing protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 28425.97 Da        Isoelectric Point: 9.1250

>NTDB_id=77777 SNM_RS10065 WP_244346682.1 1845524..1846291(-) (yaaT) [Thermus thermophilus strain SNM6-6]
MTVGVRFRTPVLRYVRFRGEAPPVDAFVVVRTGRGLEVGRVRTPPVDRPASGEVVRLASKEDLDRAARLRARAEEALHFV
RARFREEGVRAKVLGCDFTLDGRHLVIHYSAEERVNLRRFAPELARALGARIEFVAEGPREEAQYLGTLGACGMESCCST
WLQGFAQVSIKLARDQQLPLNPEKISGPCGRLLCCLTYEHPVYQELLKELPKKNARVCTKAGLCGKVQKVNPLKGTVELH
LEDGKTLEVPKEELA

Nucleotide


Download         Length: 768 bp        

>NTDB_id=77777 SNM_RS10065 WP_244346682.1 1845524..1846291(-) (yaaT) [Thermus thermophilus strain SNM6-6]
ATGACCGTGGGCGTACGCTTCCGCACCCCCGTCCTCCGCTACGTCCGCTTCCGGGGGGAGGCCCCGCCCGTGGACGCCTT
CGTGGTGGTCCGCACCGGGCGGGGGCTGGAGGTGGGCCGGGTCCGCACCCCCCCCGTGGACCGGCCGGCCTCGGGGGAGG
TGGTGCGGCTCGCCTCCAAGGAGGACCTGGACCGGGCCGCGAGGCTCCGCGCCCGGGCGGAGGAGGCCCTCCACTTCGTC
CGGGCCCGGTTCCGGGAGGAGGGGGTGCGGGCCAAGGTCCTGGGGTGCGACTTCACCCTGGACGGCCGCCACCTCGTCAT
CCACTACAGCGCCGAGGAGCGGGTGAACCTGAGGCGCTTTGCCCCCGAGCTCGCCCGCGCCCTGGGGGCCCGGATTGAGT
TCGTGGCCGAAGGCCCCCGGGAGGAGGCCCAGTACCTTGGGACCTTGGGGGCCTGCGGCATGGAGTCCTGCTGCTCCACC
TGGCTCCAGGGCTTCGCCCAGGTGTCCATCAAGCTCGCCCGGGACCAGCAGCTTCCCCTGAACCCGGAGAAGATCTCGGG
CCCCTGCGGGAGGCTTCTCTGCTGCCTCACCTACGAGCACCCCGTCTACCAGGAGCTTCTCAAGGAGCTTCCCAAGAAGA
ACGCCCGGGTCTGCACCAAGGCCGGCCTCTGCGGCAAGGTGCAGAAGGTGAACCCCCTGAAGGGCACGGTGGAGCTCCAC
CTGGAGGACGGGAAGACCTTGGAGGTTCCCAAGGAGGAGCTGGCATGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(53-135)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

35.632

100

0.365