Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   BV189_RS03590 Genome accession   NZ_CP116489
Coordinates   721172..721468 (-) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae strain 93P28H1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 716172..726468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV189_RS03565 (BV189_0727) - 716446..717204 (-) 759 WP_012054646.1 DUF3800 domain-containing protein -
  BV189_RS03570 (BV189_0728) aroE 717216..718022 (-) 807 WP_012054645.1 shikimate dehydrogenase -
  BV189_RS03575 (BV189_0729) - 718026..718577 (-) 552 WP_012054644.1 Sua5/YciO/YrdC/YwlC family protein -
  BV189_RS03580 (BV189_0730) - 718593..719129 (-) 537 WP_012054643.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
  BV189_RS03585 (BV189_0731) - 719139..721055 (-) 1917 WP_012054642.1 ABC transporter ATP-binding protein -
  BV189_RS03590 (BV189_0732) HI0659 721172..721468 (-) 297 WP_005650837.1 helix-turn-helix domain-containing protein Machinery gene
  BV189_RS03595 (BV189_0733) - 721461..721820 (-) 360 WP_005694481.1 type II toxin-antitoxin system RelE/ParE family toxin -
  BV189_RS03600 (BV189_0734) - 722090..725152 (-) 3063 WP_238145144.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  BV189_RS03605 - 725167..725325 (-) 159 WP_272524520.1 PT domain-containing protein -
  BV189_RS08895 - 725630..725719 (+) 90 Protein_670 ABC transporter -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=777546 BV189_RS03590 WP_005650837.1 721172..721468(-) (HI0659) [Haemophilus influenzae strain 93P28H1]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=777546 BV189_RS03590 WP_005650837.1 721172..721468(-) (HI0659) [Haemophilus influenzae strain 93P28H1]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGCGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAACTTGAAACGTTATTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTGCCTCTAAGGGTAAAAAATGCCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(41-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1