Detailed information NTG0777467

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PJU76_RS02240
• Genome accession: NZ_CP116458
• Coordinates: 454610..455566 (+)
• Length: 318 a.a.
• NCBI ID: WP_271780300.1
• Uniprot ID: -
• Organism: Acidithiobacillus ferriphilus strain YL25
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 449610..460566

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PJU76_RS02215 (PJU76_02215)	mutM	450220..451032 (+)	813	WP_271780296.1	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	-
PJU76_RS02220 (PJU76_02220)	-	451049..453028 (+)	1980	WP_271780297.1	dynamin family protein	-
PJU76_RS02225 (PJU76_02225)	-	453012..453263 (-)	252	WP_064219205.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PJU76_RS02230 (PJU76_02230)	coaD	453293..453817 (-)	525	WP_271780298.1	pantetheine-phosphate adenylyltransferase	-
PJU76_RS02235 (PJU76_02235)	rsmD	453810..454379 (-)	570	WP_271780299.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PJU76_RS02240 (PJU76_02240)	pilA	454610..455566 (+)	957	WP_271780300.1	signal recognition particle-docking protein FtsY	Machinery gene
PJU76_RS02245 (PJU76_02245)	ftsE	455563..456234 (+)	672	WP_064219201.1	cell division ATP-binding protein FtsE	-
PJU76_RS02250 (PJU76_02250)	ftsX	456231..457136 (+)	906	WP_271780301.1	permease-like cell division protein FtsX	-
PJU76_RS02255 (PJU76_02255)	rpoH	457212..458063 (+)	852	WP_334212472.1	RNA polymerase sigma factor RpoH	-
PJU76_RS02260 (PJU76_02260)	-	458069..458392 (+)	324	WP_271781029.1	hypothetical protein	-
PJU76_RS02265 (PJU76_02265)	hslU	458414..459736 (-)	1323	WP_271780303.1	ATP-dependent protease ATPase subunit HslU	-
PJU76_RS02270 (PJU76_02270)	hslV	459739..460278 (-)	540	WP_271780304.1	ATP-dependent protease subunit HslV	-

Sequence

Protein

• Length: 318 a.a.
• Molecular weight: 34212.25 Da
• Isoelectric Point: 7.4265

>NTDB_id=777467 PJU76_RS02240 WP_271780300.1 454610..455566(+) (pilA) [Acidithiobacillus ferriphilus strain YL25]
MPTEALSDTPGKGLFSRLRQGLTRSREQLVEGVGRLVRGKKVIDAELLEDLEALLLQADLGTAATREIMDSVAERVHRKE
LTDPNALQTALRESLLDILRPRAQPWSPEKGRSQVLLMVGINGAGKTTTIGKLAAHWKAEGFGIVLAAGDTFRAAAVEQL
QGWGKRVQVPVVTQGTGADSASVIFDALTTTRARGSELLIADTAGRLHTQGHLMEELKKIKRVLGKQDPEAPQQIWLVLD
AGTGQNALNQVRQFHDAIGLTGICITKLDGTAKGGVVAAIARAVPIPIRYIGVGEQVEDLRPFDPESFVDALFAESKS

Nucleotide

• Length: 957 bp

>NTDB_id=777467 PJU76_RS02240 WP_271780300.1 454610..455566(+) (pilA) [Acidithiobacillus ferriphilus strain YL25]
ATGCCGACAGAAGCCCTTTCCGATACACCCGGAAAAGGGCTTTTCTCCCGTCTTCGACAAGGCCTGACCCGAAGCCGGGA
ACAATTGGTCGAGGGCGTGGGGCGTCTGGTACGCGGTAAAAAGGTTATTGATGCGGAATTGCTGGAGGACCTGGAAGCCT
TATTGCTGCAAGCTGATCTGGGCACAGCTGCAACCCGGGAAATCATGGACAGCGTGGCGGAGCGGGTACATCGCAAGGAA
CTCACGGACCCCAACGCGCTCCAGACGGCGTTGCGCGAGTCACTTCTCGACATCCTGCGTCCCCGCGCGCAACCTTGGTC
GCCCGAGAAGGGGCGTTCCCAGGTGTTGCTCATGGTGGGTATCAACGGCGCGGGTAAAACGACCACCATCGGTAAGCTGG
CTGCGCATTGGAAGGCGGAGGGTTTCGGTATTGTCCTCGCCGCCGGAGACACCTTCCGCGCCGCCGCCGTGGAGCAGTTA
CAGGGCTGGGGTAAACGGGTGCAGGTGCCCGTGGTGACGCAGGGGACGGGCGCCGACAGTGCTTCCGTGATCTTTGATGC
GCTGACTACGACCCGCGCGCGCGGCAGCGAGTTGCTCATCGCCGATACCGCCGGACGCCTTCATACCCAGGGTCATCTCA
TGGAAGAATTGAAGAAGATCAAGCGGGTCCTTGGCAAACAGGACCCGGAGGCGCCACAACAGATCTGGTTGGTGCTGGAC
GCGGGCACCGGCCAGAATGCCCTTAATCAGGTGCGTCAGTTTCACGATGCGATAGGGTTGACGGGTATTTGCATCACCAA
GCTGGATGGCACCGCCAAAGGTGGCGTGGTGGCGGCCATTGCCAGGGCCGTGCCCATCCCCATTCGCTATATCGGTGTTG
GTGAGCAGGTCGAAGATCTACGTCCTTTTGACCCCGAATCTTTTGTCGATGCCCTTTTTGCGGAGTCGAAGTCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (33-95)

• SRP54-type protein, GTPase domain (SRP54) (114-313)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.974	94.969	0.513