Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   PJV85_RS06310 Genome accession   NZ_CP116457
Coordinates   1272609..1273646 (-) Length   345 a.a.
NCBI ID   WP_010922499.1    Uniprot ID   A0A4U9I5V9
Organism   Streptococcus pyogenes strain 1095     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1267609..1278646
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJV85_RS06285 (PJV85_06285) - 1267613..1268140 (-) 528 WP_002983837.1 Dps family protein -
  PJV85_RS06290 (PJV85_06290) - 1268368..1268994 (+) 627 WP_002983834.1 prepilin peptidase -
  PJV85_RS06295 (PJV85_06295) rlmN 1269076..1270155 (-) 1080 WP_002992788.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  PJV85_RS06300 (PJV85_06300) - 1270159..1270779 (-) 621 WP_002992791.1 YutD family protein -
  PJV85_RS06305 (PJV85_06305) - 1271227..1272204 (-) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  PJV85_RS06310 (PJV85_06310) sepM 1272609..1273646 (-) 1038 WP_010922499.1 SepM family pheromone-processing serine protease Regulator
  PJV85_RS06315 (PJV85_06315) coaD 1273633..1274124 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  PJV85_RS06320 (PJV85_06320) rsmD 1274114..1274653 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  PJV85_RS06325 (PJV85_06325) asnA 1274776..1275768 (-) 993 WP_002983817.1 aspartate--ammonia ligase -
  PJV85_RS06330 (PJV85_06330) arcC 1276081..1277031 (-) 951 WP_009880962.1 carbamate kinase -
  PJV85_RS06335 (PJV85_06335) - 1277051..1278382 (-) 1332 WP_136273999.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37541.24 Da        Isoelectric Point: 9.6692

>NTDB_id=777448 PJV85_RS06310 WP_010922499.1 1272609..1273646(-) (sepM) [Streptococcus pyogenes strain 1095]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=777448 PJV85_RS06310 WP_010922499.1 1272609..1273646(-) (sepM) [Streptococcus pyogenes strain 1095]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCGCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9I5V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693