Detailed information NTG0777290

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PH545_RS13770
• Genome accession: NZ_CP116414
• Coordinates: 2924447..2925454 (+)
• Length: 335 a.a.
• NCBI ID: WP_005450580.1
• Uniprot ID: K5TI37
• Organism: Vibrio harveyi strain K2014767
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2919447..2930454

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PH545_RS13745 (PH545_13745)	rplD	2919489..2920091 (-)	603	WP_289880228.1	50S ribosomal protein L4	-
PH545_RS13750 (PH545_13750)	rplC	2920109..2920738 (-)	630	WP_289880231.1	50S ribosomal protein L3	-
PH545_RS13755 (PH545_13755)	rpsJ	2920753..2921064 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
PH545_RS13760 (PH545_13760)	rpmE	2921521..2921742 (-)	222	WP_005450576.1	50S ribosomal protein L31	-
PH545_RS13765 (PH545_13765)	priA	2922039..2924240 (+)	2202	WP_045490740.1	primosomal protein N'	-
PH545_RS13770 (PH545_13770)	cytR	2924447..2925454 (+)	1008	WP_005450580.1	DNA-binding transcriptional regulator CytR	Regulator
PH545_RS13775 (PH545_13775)	-	2925620..2926165 (+)	546	WP_005450581.1	SPOR domain-containing protein	-
PH545_RS13780 (PH545_13780)	hslV	2926486..2927037 (+)	552	WP_289880232.1	ATP-dependent protease subunit HslV	-
PH545_RS13785 (PH545_13785)	hslU	2927067..2928398 (+)	1332	WP_289880233.1	HslU--HslV peptidase ATPase subunit	-
PH545_RS13790 (PH545_13790)	-	2928706..2929623 (+)	918	WP_005450584.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PH545_RS13795 (PH545_13795)	rraA	2929699..2930226 (+)	528	WP_005450585.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36918.48 Da
• Isoelectric Point: 5.9796

>NTDB_id=777290 PH545_RS13770 WP_005450580.1 2924447..2925454(+) (cytR) [Vibrio harveyi strain K2014767]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKEEQYSIVADFSFEGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=777290 PH545_RS13770 WP_005450580.1 2924447..2925454(+) (cytR) [Vibrio harveyi strain K2014767]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCTACGGTATCGCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCATCAACAAGAAAGAGAGTGGAAGATGCCGTACTTGAAGCTGGTTATTCACCGAATTCATTAGCTCGTAATT
TACGTAGAAATGAATCAAAGACCATTGTCACTATCGTACCGGACATATGCGATCCGTATTTCTCTGAAATCATTCGCGGT
ATCGAAGATGCAGCAATGGAACACGGTTACCTAGTTCTTCTCGGCGATAGCGGTCAGCAAAAAAAGCGCGAAAGCTCATT
CGTAAACTTAGTATTCACCAAGCAAGCTGATGGCATGTTACTACTGGGCACCGACTTACCATTCGATGTCAGCAAGCCAG
AGCAGAAAAACCTACCACCAATGGTCATGGCGTGCGAATTCGCTCCTGAGCTGGAACTACCAACGGTGCATATCGATAAC
TTGACCTCTGCATTTGAAGCCGTGAACTACCTGACGCAACTTGGTCACAAGCGTATTGCTCAGATCTCTGGTCCAGATAC
TGCGGTGCTGTGCCAGTTCCGCCAACAAGGTTACCAACAAGCACTTCGCCGTGCTGGTATTAGTAAAGAAGAGCAATACA
GCATTGTGGCTGACTTCTCTTTCGAAGGTGGCGTTCAAGCCGTACGCAAACTTCTCGAACTGCCTGAACCACCAACCGCT
CTATTCTGTCACTGTGACACCATGGCGATTGGTGCTATTCAAGAGGCGAAACGTCTTGGTCTGCGTATTCCGCAGGATTT
ATCGGTTGTCGGCTTTGATGATATTCAATTCGCGCAATATTGCGATCCACCGTTAACCACCATCTCTCAACCACGTTATG
AGATTGGTCGCCAAGCAATGCTAATGATGCTAGAGCTACTGAAAGGTCACGACGTGCACTCAGGCTCTCGCTTGCTTGAA
ACTAAATTAGTTGTGCGTGGTAGTGCAGCGCCACCACCTTTGCGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: K5TI37

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	96.386	99.104	0.955
cytR	Vibrio cholerae C6706	90.663	99.104	0.899