Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QWI19_RS17755 Genome accession   NZ_CP129123
Coordinates   3413084..3413797 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain 6D1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3408084..3418797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWI19_RS17735 ghrB 3408228..3409205 (+) 978 WP_015251153.1 D-glycerate dehydrogenase -
  QWI19_RS17740 psdB 3409243..3411183 (-) 1941 WP_015251152.1 lantibiotic ABC transporter permease PsdB -
  QWI19_RS17745 psdA 3411158..3411937 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  QWI19_RS17750 psdS 3412020..3413090 (-) 1071 WP_015251151.1 two-component sensor histidine kinase PsdS -
  QWI19_RS17755 braR 3413084..3413797 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  QWI19_RS17760 - 3413944..3414153 (+) 210 WP_029318346.1 hypothetical protein -
  QWI19_RS17765 yvcN 3414189..3414953 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  QWI19_RS17770 crh 3414954..3415211 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  QWI19_RS17775 whiA 3415235..3416185 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  QWI19_RS17780 mgfK 3416208..3417161 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  QWI19_RS17785 rapZ 3417163..3418050 (-) 888 WP_003243903.1 RNase adapter RapZ -
  QWI19_RS17790 rppI 3418075..3418551 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=777067 QWI19_RS17755 WP_003244535.1 3413084..3413797(-) (braR) [Bacillus subtilis strain 6D1]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=777067 QWI19_RS17755 WP_003244535.1 3413084..3413797(-) (braR) [Bacillus subtilis strain 6D1]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43