Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QWI19_RS15385 Genome accession   NZ_CP129123
Coordinates   2958046..2958741 (-) Length   231 a.a.
NCBI ID   WP_048655237.1    Uniprot ID   -
Organism   Bacillus subtilis strain 6D1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2953046..2963741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWI19_RS15365 yttA 2953474..2954219 (+) 746 Protein_2982 LMBR1 domain-containing protein -
  QWI19_RS15370 bceB 2954256..2956196 (-) 1941 WP_015251402.1 bacitracin ABC transporter permease BceB -
  QWI19_RS15375 bceA 2956186..2956947 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  QWI19_RS15380 bceS 2957049..2958053 (-) 1005 WP_015251401.1 two-component sensor histidine kinase BceS -
  QWI19_RS15385 braR 2958046..2958741 (-) 696 WP_048655237.1 two-component response regulator BceR Regulator
  QWI19_RS15390 ytrF 2958838..2960148 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  QWI19_RS15395 ytrE 2960138..2960833 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  QWI19_RS15400 ytrD 2960848..2961825 (-) 978 WP_048655236.1 ABC transporter permease YtrD -
  QWI19_RS15405 ytrC 2961855..2962841 (-) 987 WP_015251397.1 ABC transporter permease YtrC -
  QWI19_RS15410 ytrB 2962835..2963713 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26894.80 Da        Isoelectric Point: 5.3731

>NTDB_id=777057 QWI19_RS15385 WP_048655237.1 2958046..2958741(-) (braR) [Bacillus subtilis strain 6D1]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=777057 QWI19_RS15385 WP_048655237.1 2958046..2958741(-) (braR) [Bacillus subtilis strain 6D1]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCTATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACAAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377