Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   QWH96_RS10050 Genome accession   NZ_CP128987
Coordinates   1999334..1999783 (-) Length   149 a.a.
NCBI ID   WP_003053369.1    Uniprot ID   A0ABU0A4B8
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NS3396     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1994334..2004783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWH96_RS10030 (QWH96_10025) - 1994408..1994854 (-) 447 WP_003053378.1 dUTP diphosphatase -
  QWH96_RS10035 (QWH96_10030) - 1994962..1995729 (-) 768 WP_014612596.1 epoxyqueuosine reductase QueH -
  QWH96_RS10040 (QWH96_10035) - 1995848..1997632 (-) 1785 WP_049519386.1 ABC transporter ATP-binding protein -
  QWH96_RS10045 (QWH96_10040) rcrP 1997632..1999341 (-) 1710 WP_065359112.1 ABC transporter ATP-binding protein Regulator
  QWH96_RS10050 (QWH96_10045) rcrR 1999334..1999783 (-) 450 WP_003053369.1 MarR family transcriptional regulator Regulator
  QWH96_RS10055 (QWH96_10050) - 1999984..2001000 (+) 1017 WP_015058076.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  QWH96_RS10060 (QWH96_10055) hasC 2001032..2001934 (+) 903 WP_338433667.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  QWH96_RS10065 (QWH96_10060) - 2002125..2002739 (+) 615 WP_049519383.1 DUF6198 family protein -
  QWH96_RS10070 (QWH96_10065) - 2002916..2003590 (-) 675 WP_049519381.1 rhomboid family intramembrane serine protease -
  QWH96_RS10075 (QWH96_10070) - 2003587..2004114 (-) 528 WP_022555174.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17415.30 Da        Isoelectric Point: 9.5972

>NTDB_id=776887 QWH96_RS10050 WP_003053369.1 1999334..1999783(-) (rcrR) [Streptococcus dysgalactiae subsp. equisimilis strain NS3396]
MSRVIADLRELTHQVEQISDEIAKKYDLEHLAGPQGHVLVFLSKHQDQEIFVKDIEKELQISKSVTSNLVKRMVKNGFIK
VLPSQVDKRYKQVILAKAGREKLPLLQECRKDIEHYFFKEITREELLTVKKVIQQLKQNMLTYKGENDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=776887 QWH96_RS10050 WP_003053369.1 1999334..1999783(-) (rcrR) [Streptococcus dysgalactiae subsp. equisimilis strain NS3396]
ATGTCACGAGTAATTGCAGATTTGCGTGAGTTGACACATCAGGTTGAACAAATTAGCGATGAAATTGCAAAGAAGTATGA
CCTTGAACATTTAGCAGGACCCCAGGGACACGTTTTGGTTTTTCTATCCAAGCATCAAGATCAAGAAATTTTTGTGAAGG
ACATTGAAAAAGAACTCCAAATTTCAAAATCAGTTACCAGTAATCTTGTTAAACGCATGGTCAAAAATGGTTTTATTAAG
GTTCTTCCTTCCCAAGTAGACAAGCGCTACAAGCAAGTCATTTTGGCTAAGGCAGGACGAGAGAAACTGCCTTTGTTGCA
AGAATGTCGTAAGGATATTGAACATTATTTCTTTAAAGAAATCACGAGAGAGGAGTTGCTGACGGTTAAAAAGGTGATTC
AGCAGCTTAAGCAAAATATGCTAACTTATAAAGGAGAGAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

45.714

93.96

0.43