Detailed information NTG0776869

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PK654_RS14505
• Genome accession: NZ_CP116383
• Coordinates: 3093066..3094070 (+)
• Length: 334 a.a.
• NCBI ID: WP_271696660.1
• Uniprot ID: -
• Organism: Vibrio sp. SCSIO 43137
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3088066..3099070

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PK654_RS14485 (PK654_14485)	metJ	3088326..3088646 (+)	321	WP_271696656.1	met regulon transcriptional regulator MetJ	-
PK654_RS14490 (PK654_14490)	-	3088714..3089973 (-)	1260	WP_271696657.1	malic enzyme-like NAD(P)-binding protein	-
PK654_RS14495 (PK654_14495)	rpmE	3090140..3090358 (-)	219	WP_271696658.1	50S ribosomal protein L31	-
PK654_RS14500 (PK654_14500)	priA	3090693..3092894 (+)	2202	WP_271696659.1	primosomal protein N'	-
PK654_RS14505 (PK654_14505)	cytR	3093066..3094070 (+)	1005	WP_271696660.1	DNA-binding transcriptional regulator CytR	Regulator
PK654_RS14510 (PK654_14510)	-	3094176..3094715 (+)	540	WP_271696661.1	SPOR domain-containing protein	-
PK654_RS14515 (PK654_14515)	hslV	3094893..3095426 (+)	534	WP_271696662.1	ATP-dependent protease subunit HslV	-
PK654_RS14520 (PK654_14520)	hslU	3095443..3096777 (+)	1335	WP_271696663.1	HslU--HslV peptidase ATPase subunit	-
PK654_RS14525 (PK654_14525)	-	3096913..3097830 (+)	918	WP_271696664.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PK654_RS14530 (PK654_14530)	rraA	3097908..3098444 (+)	537	WP_271696665.1	ribonuclease E activity regulator RraA	-
PK654_RS14535 (PK654_14535)	zapB	3098494..3098736 (-)	243	WP_271696666.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36855.53 Da
• Isoelectric Point: 7.1487

>NTDB_id=776869 PK654_RS14505 WP_271696660.1 3093066..3094070(+) (cytR) [Vibrio sp. SCSIO 43137]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFTEIIRG
IEDAALENGYLVLLGDSGQQRKRESSFINLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPLVMACEYAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQISGPEEAALCQFRFQGYQQALRRAGQTMNAAYCINSDFSFEGGAKALKKLLSLPEPPTA
IFCHNDMMAIGAIQQAKKLGLRIPQDLSIVGFDDIQFSQYCDPPLTTISQPRYEIGRQAMLMMLELLKGRDVRAGSRLLE
TKLVVRNSAAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=776869 PK654_RS14505 WP_271696660.1 3093066..3094070(+) (cytR) [Vibrio sp. SCSIO 43137]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTGTCGACCGCCACTGTATCCAGAGCGTTAATGAACCCTGAGAA
AGTATCTGCGTCTACCCGTAAACGAGTTGAAGACGCTGTTTTGGAAGCTGGTTATTCCCCTAACTCCCTCGCAAGAAATC
TGCGAAGAAATGAATCTAAGACCATTGTTACGATTGTTCCCGATATCTGTGACCCCTACTTCACAGAGATCATCCGCGGA
ATTGAAGACGCAGCATTGGAAAATGGCTATCTGGTTCTGCTTGGCGACAGTGGCCAACAGCGCAAACGTGAAAGCTCATT
TATCAACCTGGTATTTACTAAGCAAGCCGACGGCATGCTACTGCTGGGTACTGACCTTCCTTTTGATGTCAGTAAACCAG
AGCAGAAAAACCTGCCTCCGTTGGTGATGGCCTGTGAATACGCGCCTGAACTTGAGCTTCCGACTGTGCATATTGATAAC
CTGACTTCTGCTTTTGAAGCGGTTAACTATCTGACCCAGATGGGCCACAAACGAATCGCCCAGATCTCCGGCCCGGAAGA
GGCTGCGCTCTGTCAGTTCCGTTTTCAGGGCTATCAACAGGCTCTTCGTCGGGCAGGGCAGACAATGAATGCCGCCTACT
GCATCAATAGTGACTTCTCTTTTGAAGGCGGTGCTAAAGCGCTGAAAAAACTACTTTCTCTGCCGGAGCCTCCTACTGCC
ATCTTCTGTCACAACGACATGATGGCCATTGGCGCCATTCAGCAGGCAAAAAAGCTTGGCCTGCGTATTCCGCAAGATCT
CTCTATTGTCGGCTTTGATGATATTCAGTTCTCTCAGTATTGTGATCCGCCGTTAACGACTATATCTCAGCCAAGGTATG
AAATTGGTCGTCAGGCGATGTTGATGATGCTTGAGTTACTAAAAGGGCGCGATGTCAGAGCGGGTTCACGCCTGCTTGAA
ACTAAGCTGGTAGTTCGTAACAGTGCAGCTCCGCCGAGAATTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	88.554	99.401	0.88
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874