Detailed information NTG0776858

Bioinformatically predicted

Overview

• Name: cqsA
• Type: Regulator
• Locus tag: PK654_RS07180
• Genome accession: NZ_CP116383
• Coordinates: 1530236..1531411 (-)
• Length: 391 a.a.
• NCBI ID: WP_271698536.1
• Uniprot ID: -
• Organism: Vibrio sp. SCSIO 43137
• Function: induction of competence (predicted from homology) Competence regulation

Genomic Context

Location: 1525236..1536411

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PK654_RS07165 (PK654_07165)	-	1525244..1525816 (-)	573	WP_271698533.1	Twin-arginine translocation pathway signal	-
PK654_RS07170 (PK654_07170)	tssI	1525816..1527852 (-)	2037	WP_271698534.1	type VI secretion system tip protein TssI/VgrG	-
PK654_RS07175 (PK654_07175)	-	1528140..1530179 (+)	2040	WP_271698535.1	response regulator	-
PK654_RS07180 (PK654_07180)	cqsA	1530236..1531411 (-)	1176	WP_271698536.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
PK654_RS07185 (PK654_07185)	-	1531617..1531940 (+)	324	WP_271698538.1	hypothetical protein	-
PK654_RS07190 (PK654_07190)	-	1532033..1532221 (+)	189	WP_271698539.1	hypothetical protein	-
PK654_RS07195 (PK654_07195)	-	1532329..1533177 (-)	849	WP_271698541.1	hypothetical protein	-
PK654_RS07200 (PK654_07200)	-	1533621..1533827 (+)	207	WP_271698544.1	hypothetical protein	-
PK654_RS07205 (PK654_07205)	-	1533888..1534337 (-)	450	WP_271698547.1	transcriptional regulator	-
PK654_RS07210 (PK654_07210)	-	1534351..1534692 (-)	342	WP_271698549.1	DUF4258 domain-containing protein	-
PK654_RS07215 (PK654_07215)	-	1535109..1535393 (+)	285	WP_271698551.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
PK654_RS07220 (PK654_07220)	-	1535371..1535724 (+)	354	WP_271698552.1	type II toxin-antitoxin system RelE/ParE family toxin	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 43202.47 Da
• Isoelectric Point: 6.8181

>NTDB_id=776858 PK654_RS07180 WP_271698536.1 1530236..1531411(-) (cqsA) [Vibrio sp. SCSIO 43137]
MITKSKPLPSFIEERLNFYIEDIIEPTQNKKHLVLGKRPNEGDIVMQSNDYLALSHNREIQAAHKRAISECDDNVVMSGV
FLQDKESKPAFEAELATFTGMESCLISQSGWAANIGLLQAICTEGTPVYIDFFAHMSLWEGARIAGASAYPFMHNNIRHL
RKQIKRYGAGIIVVDSVYSTIGTVAPLETLCDIAEESGCALLVDESHSLGTHGPRGSGLVSALGLTSRVNFITVSLAKTF
AYRAGAIIGPEKLNKTLPFISYPAIFSSTILPQEMVRLSKTLEVIKEADQKRERLFQRAGELRSGLKDIGFTIRSESQIV
SLETGTERNTEKVRDFLEQRGVFGAIFCRPATGANKNIMRFSVNADLTAADVDHVLTVCHQAYNQPKLEFV

Nucleotide

• Length: 1176 bp

>NTDB_id=776858 PK654_RS07180 WP_271698536.1 1530236..1531411(-) (cqsA) [Vibrio sp. SCSIO 43137]
ATGATAACTAAATCAAAACCTCTTCCCTCTTTTATTGAGGAACGCCTGAATTTTTATATTGAAGATATTATTGAACCAAC
GCAGAACAAAAAGCATTTGGTACTTGGAAAACGCCCTAACGAAGGGGATATCGTTATGCAGAGTAACGATTATCTGGCGT
TATCCCACAACCGCGAGATTCAGGCTGCCCATAAAAGAGCCATCTCTGAATGTGATGATAACGTGGTAATGTCCGGCGTG
TTTTTGCAGGATAAAGAGAGCAAGCCTGCGTTCGAAGCCGAACTGGCAACTTTTACCGGAATGGAGAGTTGCCTGATATC
TCAGTCAGGCTGGGCAGCGAATATTGGCCTACTTCAGGCTATATGCACCGAAGGGACTCCTGTTTATATCGATTTCTTTG
CCCATATGTCTTTATGGGAAGGTGCCAGAATTGCGGGGGCTTCTGCCTACCCTTTTATGCACAACAATATCCGTCACCTG
CGTAAACAGATAAAGCGTTACGGTGCAGGAATCATTGTGGTTGACTCGGTCTACAGCACCATAGGCACGGTAGCGCCTCT
GGAAACTCTGTGTGATATCGCAGAAGAATCTGGTTGTGCCCTTCTGGTGGATGAATCACATTCACTCGGCACACACGGGC
CCAGGGGTTCCGGCTTGGTCAGCGCATTGGGGCTGACAAGTCGTGTTAACTTTATCACCGTCAGTCTGGCAAAGACTTTT
GCCTACCGTGCCGGTGCGATTATAGGTCCTGAAAAGCTGAACAAAACACTGCCGTTTATCTCTTATCCGGCTATTTTCAG
CTCGACCATTCTGCCACAGGAGATGGTTAGGCTTAGCAAAACCCTTGAAGTGATTAAAGAAGCGGACCAGAAACGTGAAC
GGCTGTTCCAGCGCGCCGGTGAACTAAGAAGCGGGCTTAAAGATATTGGCTTTACTATCCGCAGTGAAAGTCAGATCGTA
TCACTAGAGACAGGTACGGAACGAAATACCGAAAAGGTACGTGATTTTCTTGAGCAAAGAGGCGTATTTGGTGCCATTTT
TTGCCGGCCGGCTACCGGAGCCAACAAAAACATTATGCGCTTCTCCGTTAATGCCGATTTAACGGCCGCTGATGTGGATC
ATGTGCTGACGGTATGTCATCAGGCTTACAACCAACCTAAACTAGAGTTTGTCTGA

Domains

Predicted by InterproScan.

• Aminotransferase class I and II (Aminotran_1_2) (44-376)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsA	Vibrio cholerae strain A1552	58.14	98.977	0.575