Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   QWH96_RS06975 Genome accession   NZ_CP128987
Coordinates   1349112..1349591 (-) Length   159 a.a.
NCBI ID   WP_003058929.1    Uniprot ID   A0ABU0AAE0
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NS3396     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1344112..1354591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWH96_RS06955 (QWH96_06955) - 1344411..1344752 (-) 342 WP_003054176.1 hypothetical protein -
  QWH96_RS06960 (QWH96_06960) - 1344930..1346582 (+) 1653 WP_014612356.1 NFACT family protein -
  QWH96_RS06965 (QWH96_06965) - 1346645..1347892 (-) 1248 WP_003062250.1 CDC27 family protein -
  QWH96_RS06970 (QWH96_06970) - 1347882..1349063 (-) 1182 WP_003059678.1 AI-2E family transporter -
  QWH96_RS06975 (QWH96_06975) mutX 1349112..1349591 (-) 480 WP_003058929.1 8-oxo-dGTP diphosphatase Machinery gene
  QWH96_RS06980 (QWH96_06980) - 1349787..1349978 (+) 192 WP_003058922.1 hypothetical protein -
  QWH96_RS06985 (QWH96_06985) - 1350066..1350377 (-) 312 WP_239682069.1 CPBP family intramembrane glutamic endopeptidase -
  QWH96_RS06990 (QWH96_06990) - 1350340..1350705 (-) 366 WP_003060933.1 hypothetical protein -
  QWH96_RS06995 (QWH96_06995) rfbB 1350894..1351937 (-) 1044 WP_044565428.1 dTDP-glucose 4,6-dehydratase -
  QWH96_RS07000 (QWH96_07000) - 1352181..1352774 (-) 594 WP_003057688.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  QWH96_RS07005 (QWH96_07005) rfbA 1352774..1353643 (-) 870 WP_003057684.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18574.75 Da        Isoelectric Point: 4.2471

>NTDB_id=776852 QWH96_RS06975 WP_003058929.1 1349112..1349591(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain NS3396]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=776852 QWH96_RS06975 WP_003058929.1 1349112..1349591(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain NS3396]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGGAAGTGGATTTCAGTTGGAGGCAAGCTTGAAGCGGGAGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686